Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335H04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304...    29   1.7  
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803...    27   9.1  

>10_08_0943 +
           21728294-21728675,21728767-21728840,21729469-21730443,
           21730617-21730683,21730765-21730827,21731001-21731064,
           21731162-21731255,21731352-21731435,21731523-21731612,
           21731708-21731735,21732117-21732596,21732679-21732740,
           21732820-21732929,21733014-21733101,21733228-21733557,
           21733782-21733904
          Length = 1037

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 339 YNQAKELVAFYGSNIAILFECSVRT 265
           YN+ K L  F G N  I +ECS+R+
Sbjct: 532 YNEQKMLERFGGKNFVIKYECSLRS 556


>07_03_0685 -
           20679883-20679927,20680034-20680087,20680179-20680390,
           20680476-20680550,20683094-20683168,20686196-20686264,
           20686349-20686502,20686577-20686654,20689102-20689194,
           20689491-20689640,20690134-20690268,20691009-20691098,
           20691412-20691453,20691796-20692053,20692131-20692207,
           20693126-20693186,20693687-20693905,20694936-20695208,
           20695314-20695505,20695841-20696011
          Length = 840

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 309 RKQLTPLPGYTKKKLSYDASVASIKNKCCCS 401
           RK LT + G  KK+ SY+  +  +K + CC+
Sbjct: 768 RKSLTTVQGL-KKEFSYNKILKDLKKEFCCN 797


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,456,151
Number of Sequences: 37544
Number of extensions: 179516
Number of successful extensions: 252
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)