Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335H04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p pro...    29   5.1  
AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin recep...    29   5.1  
AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA...    29   5.1  

>AY058501-1|AAL13730.1| 1072|Drosophila melanogaster LD19406p
           protein.
          Length = 1072

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 281 SVRSEPKIHTVNCRFKLIAVHKKTRPFLINCFHEIFVI 168
           +V +EP+I   + + KL+A  + T P   NC   I+V+
Sbjct: 797 TVVAEPRIQQPSIKMKLLAFSQHTPPSNANCSLRIYVV 834


>AF247762-1|AAF74193.1| 1072|Drosophila melanogaster Netrin receptor
           DUnc5 protein.
          Length = 1072

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 281 SVRSEPKIHTVNCRFKLIAVHKKTRPFLINCFHEIFVI 168
           +V +EP+I   + + KL+A  + T P   NC   I+V+
Sbjct: 797 TVVAEPRIQQPSIKMKLLAFSQHTPPSNANCSLRIYVV 834


>AE013599-2049|AAF58143.2| 1072|Drosophila melanogaster CG8166-PA
           protein.
          Length = 1072

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 281 SVRSEPKIHTVNCRFKLIAVHKKTRPFLINCFHEIFVI 168
           +V +EP+I   + + KL+A  + T P   NC   I+V+
Sbjct: 797 TVVAEPRIQQPSIKMKLLAFSQHTPPSNANCSLRIYVV 834


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,084,747
Number of Sequences: 53049
Number of extensions: 350784
Number of successful extensions: 621
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)