Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335G12f
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical pr... 64 6e-11
L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical pr... 64 6e-11
AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 58 2e-09
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 54 5e-08
Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical p... 52 3e-07
AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical ... 49 1e-06
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 33 0.072
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 32 0.17
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 31 0.50
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 30 0.67
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 30 0.67
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 30 0.67
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 30 0.67
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 30 0.67
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 30 0.67
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 30 0.67
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 2.7
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 2.7
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 28 2.7
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 2.7
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 27 4.7
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 4.7
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 27 8.2
U41532-1|AAF99904.3| 370|Caenorhabditis elegans Hypothetical pr... 27 8.2
>L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical
protein C02D5.2b protein.
Length = 263
Score = 63.7 bits (148), Expect = 6e-11
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRGL--VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVL 175
+F QL W L +++ ++P+GK+ + + C HG EC N++ CV+
Sbjct: 94 RFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVI 153
Query: 176 KDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDXLLASYG 355
DR + V+C+ + S D+++ C+T+ + SE ++++ CAS +G LLA G
Sbjct: 154 -DRFGFPHRYLPGVLCMQGKYSLDEAMK-CVTE-NYPSEYERMRECASGTRGRRLLALSG 210
Query: 356 DKTDAVMRPLAFVPPLLL 409
KT ++ + F+P +++
Sbjct: 211 QKTASLTPAIDFIPWIVI 228
>L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical
protein C02D5.2a protein.
Length = 323
Score = 63.7 bits (148), Expect = 6e-11
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRGL--VKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVL 175
+F QL W L +++ ++P+GK+ + + C HG EC N++ CV+
Sbjct: 154 RFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVI 213
Query: 176 KDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDXLLASYG 355
DR + V+C+ + S D+++ C+T+ + SE ++++ CAS +G LLA G
Sbjct: 214 -DRFGFPHRYLPGVLCMQGKYSLDEAMK-CVTE-NYPSEYERMRECASGTRGRRLLALSG 270
Query: 356 DKTDAVMRPLAFVPPLLL 409
KT ++ + F+P +++
Sbjct: 271 QKTASLTPAIDFIPWIVI 288
>AF077534-7|AAK71376.1| 319|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 48
protein.
Length = 319
Score = 58.4 bits (135), Expect = 2e-09
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKD 181
KFI QL V+ F+G + +++VP+G S + DG SF C+HG EC N++Q+CV+
Sbjct: 156 KFIANQLGSVFNQFQGQLILELVPWGNSRIMR-DG--SFSCNHGQKECDANRLQSCVIDI 212
Query: 182 RNLQDTEKMEIVICL---MNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDXLLASY 352
++ + ++C + + ++ TC + S+ ++++C +G L
Sbjct: 213 LKVKGA--LPFIVCFERNIQHYGVEHAMQTCSAFI--RSQYRQIRQCYDGPRGVQLQREA 268
Query: 353 GDKTDAVM-RPLAFVPPLLL 409
KT + P+ VP LL+
Sbjct: 269 AQKTMSTRPNPILEVPYLLI 288
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 54.0 bits (124), Expect = 5e-08
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRG--LVKVKMVPYG-KSTHDKVDGKWSFICHHGADECYGNKVQACV 172
++ + PVW + + + P+G S + C HG EC N +QACV
Sbjct: 89 RYFRNHIMPVWTSLQASSTINITYHPFGLASCRRSAETGIRCNCQHGPAECQLNMLQACV 148
Query: 173 LKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDK--LKRCASSEQGDXLLA 346
+ + + IV C+ + ++D C+ + D+ + RCA S+ G L+
Sbjct: 149 ISTLQVPQL-YLPIVNCMQGKNKFSSAVDDCIVNFRPRPDLDENFMARCAQSQLGAKLMM 207
Query: 347 SYGDKTDAVMRPLAFVPPLLL 409
+G + V L +VP +L+
Sbjct: 208 QHGYRQKEVASELDWVPWILI 228
>Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical
protein ZK669.3 protein.
Length = 218
Score = 51.6 bits (118), Expect = 3e-07
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Frame = +2
Query: 26 PVWRDF--RGLVKVKMVPYG-KSTHDKVDGKWSFIC--HHGADECYGNKVQACVLKD-RN 187
P+WR G + PYG K+T + +C HHG EC N++QACV++ N
Sbjct: 54 PMWRMLGSTGRINFDYHPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPN 113
Query: 188 LQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDXLLASYGDKTD 367
+D ME+V C+ + + + + C K+ + K+ CA S G L + +
Sbjct: 114 FED--YMEVVTCIQGKQNISMAAEVCFEGPTKLDRT-KMMECAESRHGRKLFSDQ-ENIV 169
Query: 368 AVMRPLAFVPPLLLXRNT 421
A M P P +L T
Sbjct: 170 AQMAPEMDWAPWILINGT 187
>Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical
protein R07E5.4 protein.
Length = 186
Score = 51.6 bits (118), Expect = 3e-07
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRGLVKVKMVPYGKS--THDKVDGKWSFICHHGADECYGNKVQACVL 175
K + Q+ P + + G++ +++VP+GK T+D + + C HGA EC N++Q C +
Sbjct: 34 KLLREQIWPFYVNRPGIMNLQIVPFGKGDCTYD-YNRNFHCTCMHGATECDLNRLQNCAI 92
Query: 176 KDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDXL 340
+ + +V CL T+ + CL+++ ++ KL CA+++ G+ L
Sbjct: 93 ---SYFPRRHLGLVTCLQGLTTLREGFSKCLSRLSPNTQR-KLIECATTQTGELL 143
>AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical
protein Y18D10A.2 protein.
Length = 220
Score = 49.2 bits (112), Expect = 1e-06
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRGLVK--VKMVPYGKSTHD-KVDGKWSFICHHGADECYGNKVQACV 172
KFI QL P +++++G + +K+ + T +VDGK+ C HGA EC NK+Q C
Sbjct: 52 KFIHNQLVPFYQNYKGNLSDGLKLDFHAVPTGGHQVDGKYVNRCLHGALECALNKLQMC- 110
Query: 173 LKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDXLL 343
K QD + C+ +T+ L CL + E ++ CA SE+G+ LL
Sbjct: 111 SKKHIKQDW--LVTAGCIQGKTAYSAGL-KCLPDTE---EGKIVQNCAESEEGEYLL 161
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 5 FITTQLAP-VWRDFRGLVKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKD 181
F+T QL P V+++F V +++VP+G + KV + C HG +EC NK + C +
Sbjct: 92 FLTKQLYPIVFKNFANYVNIELVPFGNA---KVLEDGTIKCQHGEEECSINKFEGCFID- 147
Query: 182 RNLQDTEKMEIVICL 226
++QD + + C+
Sbjct: 148 -SMQDQSPLPTLSCI 161
>Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical
protein W04A4.3 protein.
Length = 149
Score = 40.7 bits (91), Expect = 5e-04
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +2
Query: 2 KFITTQLAPVWRDF---RGLVKVKMVPYGKSTHDKV-DGKWSFICHHGADECYGNKVQAC 169
K+ TQLAP + +G +KMV + S K +G C +G EC NK+Q C
Sbjct: 49 KWFRTQLAPFLGNLTAKKGPKNLKMVYHPLSIGQKKGNGTAVATCENGWLECQLNKLQCC 108
Query: 170 VLK-DRNLQDTEKMEIVICLMNQTSPDKSLDTCL 268
K RN+ D E + ++ C+ + K+LD CL
Sbjct: 109 TKKYSRNVTDFEILAVLECIQGKQWFGKALD-CL 141
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 33.5 bits (73), Expect = 0.072
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 181 PQPPG-HGEDGDCNMPHEPDQPRQVFGHVLNSS 276
P PPG +G+ GDC MP P +PR L+ S
Sbjct: 560 PGPPGPNGDHGDCGMPGAPGKPRSAGSDGLSGS 592
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 2 KFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS---FICHHGA 136
K TT L P +VK+ PYG +T ++ GKW FI HH A
Sbjct: 152 KTTTTTLRPTKPRPMTKPRVKVCPYGWATFNRPSGKWCIKVFIGHHAA 199
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 30.7 bits (66), Expect = 0.50
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 181 PQPPG-HGEDGDCNMPHEPDQP 243
P PPG +G+ GDC MP P +P
Sbjct: 559 PGPPGPNGDHGDCGMPGAPGKP 580
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 848 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 897
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 916 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 965
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 916 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 965
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 916 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 965
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 916 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 965
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 916 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 965
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical protein
T05A10.1j protein.
Length = 1509
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 916 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 965
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 474 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 523
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 157 GASLRPEGPQPPGHGEDGDCNMPHE---PDQPRQVFGHVLNSSGQDVGVG 297
G ++ E PPG +D D + E DQ + + +SGQD+G+G
Sbjct: 848 GVQIKQEPEDPPGDDDDDDDDCIIEVVDEDQKQHIAMLTAAASGQDIGIG 897
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 254 LDTCLTQVDKMSESDKLKRCASSEQGDXLLASYGDK 361
+DT +TQ K ++ KR A ++QG+ L A +K
Sbjct: 450 VDTFMTQYKKHAQKKLAKRAAQNQQGEKLAAEEKEK 485
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 172 PEGPQPPGHGEDGDCNMPHEPDQPR 246
P GPQ PG G ++P P PR
Sbjct: 243 PPGPQVPGSYPSGPADIPQGPGMPR 267
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 28.3 bits (60), Expect = 2.7
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +2
Query: 161 QACVLKDRNLQDTE-KMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASS----E 325
Q C + Q+ K +V C M S SL T +D+M +++ RC SS
Sbjct: 1522 QLCRIASEKTQNPNVKKHLVGCAMGVASKTSSLVTAFKDLDRMPDAE--SRCTSSASELR 1579
Query: 326 QGDXLLASYGDKTD 367
Q L + DK D
Sbjct: 1580 QVALQLLHFADKPD 1593
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 158 VQACVLKDRNLQDTEKMEIVICLMN--QTSPDKSLDTCLTQVDKMSESD 298
V+ V K RN+ D + ++ CL + Q+SPD + T +T K +E D
Sbjct: 920 VRIAVAKGRNIDDEPSLPLLECLRSRAQSSPDHRILTLVT--SKNAEQD 966
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 28.3 bits (60), Expect = 2.7
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +2
Query: 161 QACVLKDRNLQDTE-KMEIVICLMNQTSPDKSLDTCLTQVDKMSESDKLKRCASS----E 325
Q C + Q+ K +V C M S SL T +D+M +++ RC SS
Sbjct: 1522 QLCRIASEKTQNPNVKKHLVGCAMGVASKTSSLVTAFKDLDRMPDAE--SRCTSSASELR 1579
Query: 326 QGDXLLASYGDKTD 367
Q L + DK D
Sbjct: 1580 QVALQLLHFADKPD 1593
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 245 DKSLDTCLTQVDKMSESDKLKRCASSEQGDXLLASYGDKTDAVMR 379
DK++ + D +S D K A S+ + +YGDK AV R
Sbjct: 86 DKTVSAVFSLRDSVSADDVQKVLAGSKLVSQVETTYGDKATAVCR 130
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 245 DKSLDTCLTQVDKMSESDKLKRCASSEQGDXLLASYGDKTDAVMR 379
DK++ + D +S D K A S+ + +YGDK AV R
Sbjct: 99 DKTVSAVFSLRDSVSADDVQKVLAGSKLVSQVETTYGDKATAVCR 143
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 26.6 bits (56), Expect = 8.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 166 LRPEGPQ----PPGHGEDGDCNMPHEPDQPRQVFGHVLNSSGQDVGVG 297
L P GPQ PPG G N P +P QP + G + +G+ G G
Sbjct: 214 LGPPGPQGMKGPPGPSGKGS-NQPGQPGQPGDIGG--IGKTGKMGGYG 258
>U41532-1|AAF99904.3| 370|Caenorhabditis elegans Hypothetical
protein F11D5.5 protein.
Length = 370
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 50 LVKVKMVPYGKSTHDKVD-GKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICL 226
+V++ P DKV+ K S +HG + C ++V +K++NL D ++ +
Sbjct: 63 MVQLPESPKWLIQQDKVEEAKVSIRFYHGKN-CTIHEVVTSFIKEKNLTDKNRISLKQIW 121
Query: 227 MNQTSPDKSLDTCLTQV 277
N+T + S TC ++
Sbjct: 122 DNETLREVSF-TCFNEL 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,709,128
Number of Sequences: 27780
Number of extensions: 213366
Number of successful extensions: 696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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