Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335G11f
         (499 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886...    29   2.7  
03_05_0291 - 22837412-22838128                                         28   4.8  
01_06_1074 + 34318685-34319314,34319429-34319546,34319662-343198...    28   4.8  
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351     27   6.3  
09_02_0366 + 7941550-7942161,7942230-7942775                           27   6.3  
03_06_0063 - 31391870-31392679                                         27   8.4  
02_04_0072 + 19463801-19464166,19464608-19464701,19464805-194649...    27   8.4  
01_01_0867 - 6773411-6774682,6775008-6775643                           27   8.4  

>12_02_0884 -
           23986393-23987486,23988213-23988314,23988561-23988642,
           23989231-23989368
          Length = 471

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 221 QNNAHVCDVCECTYDTESKVRTHAKRHYLR 132
           ++N+H C+ C  ++ +   +  H +RHY+R
Sbjct: 379 KDNSHRCNTCGKSFGSGQALGGHMRRHYVR 408


>03_05_0291 - 22837412-22838128
          Length = 238

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 218 NNAHVCDVCECTYDTESKVRTHAKRHY 138
           N  H C VC+ T+ T   +  H + HY
Sbjct: 152 NKVHECSVCKKTFPTGQALGGHKRCHY 178


>01_06_1074 +
           34318685-34319314,34319429-34319546,34319662-34319814,
           34319906-34320021,34320135-34320302,34320424-34320551,
           34320645-34320744,34320866-34320958
          Length = 501

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +2

Query: 296 CCM-SRDGRPRSRDKVKGARQSSQGQYGGAYSWRWLPN*TRAPAGPI*GQPEDFIEITST 472
           CC  S D  P S D   G   SS  + G + S     N   AP GP+ G+P + +    T
Sbjct: 4   CCPGSGDAEPASSDASTG-NGSSSFKAGASPSSAPAQNKPPAPIGPVLGRPMEDVRSIYT 62

Query: 473 ISE 481
           I +
Sbjct: 63  IGK 65


>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
          Length = 415

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 221 QNNAHVCDVCECTYDTESKVRTH--AKRH 141
           QN  + CD+CE    +E  + +H   KRH
Sbjct: 378 QNRMYYCDICEVRCSSEKMMASHLAGKRH 406


>09_02_0366 + 7941550-7942161,7942230-7942775
          Length = 385

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = -3

Query: 119 LHMWAHNTTYRSSTYVLRAVDTCLFGLGTEPPT---RSPC 9
           +HMW H + YR  +  LR   T   G G  PP    R PC
Sbjct: 205 MHMWGHGSQYRKGSESLRGAIT--VG-GAAPPASLMRLPC 241


>03_06_0063 - 31391870-31392679
          Length = 269

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 218 NNAHVCDVCECTYDTESKVRTHAKRHY 138
           N  H C +C+  + T   +  H ++HY
Sbjct: 163 NRVHRCSICQKEFPTGQALGGHKRKHY 189


>02_04_0072 +
           19463801-19464166,19464608-19464701,19464805-19464926,
           19465033-19465130,19465461-19465560
          Length = 259

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +2

Query: 329 RDKVKGARQSSQGQYGGAYSWRWLPN*TRAPAGPI*GQPEDFIEITSTISEPESI 493
           +D  KG  +S  G  GG +S  W P  TR   GP     + F +  S I + E +
Sbjct: 118 QDLSKG--ESLLGSLGGFFSKPWKPKKTRQIKGPAHVSDDSFKKKASHIEQREKL 170


>01_01_0867 - 6773411-6774682,6775008-6775643
          Length = 635

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 150 EETLFEVS*VLTHVGSQYHLSFKYVCLESSGYLSLWAGNR 31
           E  +FE+    +  G++++L  +Y  + SS  ++ W GNR
Sbjct: 36  ENGIFELG-FFSPSGTKHYLGIRYKNITSSNPVNFWLGNR 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,381,637
Number of Sequences: 37544
Number of extensions: 245918
Number of successful extensions: 610
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)