Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335G08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001698-1|AAN71453.1|  650|Drosophila melanogaster RE60089p pro...    28   6.7  
AE013599-3783|AAM68294.1|  650|Drosophila melanogaster CG3167-PB...    28   6.7  
AE013599-3782|AAF47143.1|  650|Drosophila melanogaster CG3167-PA...    28   6.7  
BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p pro...    28   8.8  
BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p pro...    28   8.8  
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA...    28   8.8  

>BT001698-1|AAN71453.1|  650|Drosophila melanogaster RE60089p
           protein.
          Length = 650

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 117 IISRHQKHKRSDKLKKKNKFYTL 49
           +I + +KH R+DKLKK++  Y L
Sbjct: 36  LIEKLRKHTRADKLKKRSNKYVL 58


>AE013599-3783|AAM68294.1|  650|Drosophila melanogaster CG3167-PB,
           isoform B protein.
          Length = 650

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 117 IISRHQKHKRSDKLKKKNKFYTL 49
           +I + +KH R+DKLKK++  Y L
Sbjct: 36  LIEKLRKHTRADKLKKRSNKYVL 58


>AE013599-3782|AAF47143.1|  650|Drosophila melanogaster CG3167-PA,
           isoform A protein.
          Length = 650

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 117 IISRHQKHKRSDKLKKKNKFYTL 49
           +I + +KH R+DKLKK++  Y L
Sbjct: 36  LIEKLRKHTRADKLKKRSNKYVL 58


>BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p
           protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 168 KKPLNKYTYLNECKFINIISRHQKHKRSDKLKKKNK 61
           KK LNK    N+CK    + + +K K+  K KKK K
Sbjct: 103 KKKLNKK---NKCKRTRKVEKKKKKKKKKKKKKKKK 135


>BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p
           protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 168 KKPLNKYTYLNECKFINIISRHQKHKRSDKLKKKNK 61
           KK LNK    N+CK    + + +K K+  K KKK K
Sbjct: 103 KKKLNKK---NKCKRTRKVEKKKKKKKKKKKKKKKK 135


>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
            protein.
          Length = 4010

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 132  IHLNKCICSMAFLQYFYCDFTGTKSNTK 215
            +  +K +    F Q  YCDFT  K++TK
Sbjct: 2221 VEKDKSLQESDFRQLIYCDFTNPKADTK 2248


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,075,151
Number of Sequences: 53049
Number of extensions: 297756
Number of successful extensions: 647
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)