Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335G07f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022898-1|AAH22898.1| 195|Homo sapiens COMM domain containing ... 44 3e-04
AY542159-1|AAS22241.1| 195|Homo sapiens COMMD3 protein. 44 3e-04
AL158211-5|CAI15953.1| 148|Homo sapiens COMM domain containing ... 44 3e-04
AL158211-3|CAI15951.1| 195|Homo sapiens COMM domain containing ... 44 3e-04
AL158211-2|CAI15950.1| 162|Homo sapiens COMM domain containing ... 44 3e-04
AF201948-1|AAF17240.1| 195|Homo sapiens PIL protein protein. 44 3e-04
BC065729-1|AAH65729.1| 224|Homo sapiens COMM domain containing ... 38 0.016
BC003055-1|AAH03055.1| 224|Homo sapiens COMM domain containing ... 38 0.016
BC002672-1|AAH02672.1| 224|Homo sapiens COMM domain containing ... 38 0.016
AK023070-1|BAB14389.1| 224|Homo sapiens protein ( Homo sapiens ... 38 0.016
AK001477-1|BAA91714.1| 224|Homo sapiens protein ( Homo sapiens ... 38 0.016
AF290195-1|AAG09915.1| 224|Homo sapiens unknown protein. 38 0.016
AF113540-1|AAF14877.1| 223|Homo sapiens hypothalamus protein HT... 38 0.016
AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat... 31 1.9
AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein. 31 1.9
AB032974-1|BAA86462.2| 543|Homo sapiens KIAA1148 protein protein. 31 1.9
>BC022898-1|AAH22898.1| 195|Homo sapiens COMM domain containing 3
protein.
Length = 195
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 157 NIVKVLPNVIDVEWKLEVTSSPNASSE--NVLYTVTLK---TDDGG--DVRFTCGTQELQ 315
+I + LP++ DV W+LE N Y VTL TD ++ F+C ++LQ
Sbjct: 117 SIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQ 176
Query: 316 DLVYKLKDLVRHCER 360
DLV KLKD + ER
Sbjct: 177 DLVGKLKDASKSLER 191
>AY542159-1|AAS22241.1| 195|Homo sapiens COMMD3 protein.
Length = 195
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 157 NIVKVLPNVIDVEWKLEVTSSPNASSE--NVLYTVTLK---TDDGG--DVRFTCGTQELQ 315
+I + LP++ DV W+LE N Y VTL TD ++ F+C ++LQ
Sbjct: 117 SIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQ 176
Query: 316 DLVYKLKDLVRHCER 360
DLV KLKD + ER
Sbjct: 177 DLVGKLKDASKSLER 191
>AL158211-5|CAI15953.1| 148|Homo sapiens COMM domain containing 3
protein.
Length = 148
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 157 NIVKVLPNVIDVEWKLEVTSSPNASSE--NVLYTVTLK---TDDGG--DVRFTCGTQELQ 315
+I + LP++ DV W+LE N Y VTL TD ++ F+C ++LQ
Sbjct: 70 SIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQ 129
Query: 316 DLVYKLKDLVRHCER 360
DLV KLKD + ER
Sbjct: 130 DLVGKLKDASKSLER 144
>AL158211-3|CAI15951.1| 195|Homo sapiens COMM domain containing 3
protein.
Length = 195
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 157 NIVKVLPNVIDVEWKLEVTSSPNASSE--NVLYTVTLK---TDDGG--DVRFTCGTQELQ 315
+I + LP++ DV W+LE N Y VTL TD ++ F+C ++LQ
Sbjct: 117 SIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQ 176
Query: 316 DLVYKLKDLVRHCER 360
DLV KLKD + ER
Sbjct: 177 DLVGKLKDASKSLER 191
>AL158211-2|CAI15950.1| 162|Homo sapiens COMM domain containing 3
protein.
Length = 162
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 157 NIVKVLPNVIDVEWKLEVTSSPNASSE--NVLYTVTLK---TDDGG--DVRFTCGTQELQ 315
+I + LP++ DV W+LE N Y VTL TD ++ F+C ++LQ
Sbjct: 84 SIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQ 143
Query: 316 DLVYKLKDLVRHCER 360
DLV KLKD + ER
Sbjct: 144 DLVGKLKDASKSLER 158
>AF201948-1|AAF17240.1| 195|Homo sapiens PIL protein protein.
Length = 195
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 157 NIVKVLPNVIDVEWKLEVTSSPNASSE--NVLYTVTLK---TDDGG--DVRFTCGTQELQ 315
+I + LP++ DV W+LE N Y VTL TD ++ F+C ++LQ
Sbjct: 117 SIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQ 176
Query: 316 DLVYKLKDLVRHCER 360
DLV KLKD + ER
Sbjct: 177 DLVGKLKDASKSLER 191
>BC065729-1|AAH65729.1| 224|Homo sapiens COMM domain containing 5
protein.
Length = 224
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 149 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 208
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 209 KEMADLEKRCER 220
>BC003055-1|AAH03055.1| 224|Homo sapiens COMM domain containing 5
protein.
Length = 224
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 149 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 208
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 209 KEMADLEKRCER 220
>BC002672-1|AAH02672.1| 224|Homo sapiens COMM domain containing 5
protein.
Length = 224
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 149 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 208
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 209 KEMADLEKRCER 220
>AK023070-1|BAB14389.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ13008 fis, clone NT2RP3000456. ).
Length = 224
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 149 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 208
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 209 KEMADLEKRCER 220
>AK001477-1|BAA91714.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ10615 fis, clone NT2RP2005441. ).
Length = 224
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 149 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 208
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 209 KEMADLEKRCER 220
>AF290195-1|AAG09915.1| 224|Homo sapiens unknown protein.
Length = 224
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 149 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 208
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 209 KEMADLEKRCER 220
>AF113540-1|AAF14877.1| 223|Homo sapiens hypothalamus protein HT002
protein.
Length = 223
Score = 38.3 bits (85), Expect = 0.016
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Frame = +1
Query: 172 LPNVIDVEWKLEVTSSPNASSENVLYTV--TLKTDDGGDVRFTCGTQELQDLVY------ 327
LP+V D W+++V S +A + ++ +V LK DG RF T + Q+L Y
Sbjct: 148 LPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAYRFEVPTAKFQELRYSVALVL 207
Query: 328 -KLKDLVRHCER 360
++ DL + CER
Sbjct: 208 KEMADLEKRCER 219
>AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat
containing protein protein.
Length = 1101
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 302 VPQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHS 192
+PQ SPPSS+ N+ YN + G L+ +++S
Sbjct: 996 LPQPESFSPPSSISNIAFYNKTNNAQNGHLLEDDYYS 1032
>AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.
Length = 1864
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 302 VPQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHS 192
+PQ SPPSS+ N+ YN + G L+ +++S
Sbjct: 1759 LPQPESFSPPSSISNIAFYNKTNNAQNGHLLEDDYYS 1795
>AB032974-1|BAA86462.2| 543|Homo sapiens KIAA1148 protein protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 302 VPQVNLTSPPSSVFNVTVYNTFSELALGELVTSNFHS 192
+PQ SPPSS+ N+ YN + G L+ +++S
Sbjct: 438 LPQPESFSPPSSISNIAFYNKTNNAQNGHLLEDDYYS 474
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,456,443
Number of Sequences: 237096
Number of extensions: 1230827
Number of successful extensions: 6115
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6109
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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