Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335G07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021322-1|AAX33470.1|  211|Drosophila melanogaster RE09151p pro...    39   0.004
BT001383-1|AAN71138.1|  209|Drosophila melanogaster GH03263p pro...    39   0.004
AE014298-1297|AAG22414.1|  211|Drosophila melanogaster CG12106-P...    39   0.004
AE014297-2910|AAF55836.3|  261|Drosophila melanogaster CG31189-P...    29   3.8  
AE014134-3191|AAF53867.2|  476|Drosophila melanogaster CG10895-P...    28   8.8  
AB007821-1|BAA28755.1|  476|Drosophila melanogaster long form of...    28   8.8  

>BT021322-1|AAX33470.1|  211|Drosophila melanogaster RE09151p
           protein.
          Length = 211

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
 Frame = +1

Query: 175 PNVIDVEWKL--EVTSSPN-ASSENVLYTVTLKT--DDGGD----VRFTCGTQELQDLVY 327
           P++ D++W++  +V SS +  S+    + + L       G+    V F C  +ELQ L+ 
Sbjct: 137 PHITDIQWRIVCDVKSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLIN 196

Query: 328 KLKDLVRHCER 360
           +LK++ RHC++
Sbjct: 197 RLKEIERHCQQ 207


>BT001383-1|AAN71138.1|  209|Drosophila melanogaster GH03263p
           protein.
          Length = 209

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
 Frame = +1

Query: 175 PNVIDVEWKL--EVTSSPN-ASSENVLYTVTLKT--DDGGD----VRFTCGTQELQDLVY 327
           P++ D++W++  +V SS +  S+    + + L       G+    V F C  +ELQ L+ 
Sbjct: 135 PHITDIQWRIVCDVKSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLIN 194

Query: 328 KLKDLVRHCER 360
           +LK++ RHC++
Sbjct: 195 RLKEIERHCQQ 205


>AE014298-1297|AAG22414.1|  211|Drosophila melanogaster CG12106-PA
           protein.
          Length = 211

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
 Frame = +1

Query: 175 PNVIDVEWKL--EVTSSPN-ASSENVLYTVTLKT--DDGGD----VRFTCGTQELQDLVY 327
           P++ D++W++  +V SS +  S+    + + L       G+    V F C  +ELQ L+ 
Sbjct: 137 PHITDIQWRIVCDVKSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLIN 196

Query: 328 KLKDLVRHCER 360
           +LK++ RHC++
Sbjct: 197 RLKEIERHCQQ 207


>AE014297-2910|AAF55836.3|  261|Drosophila melanogaster CG31189-PA
           protein.
          Length = 261

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 386 FSQENSHFVLSQCLTKSFNLYTRSCSS*VPQVNLTSPPSSVFN 258
           F+ E  HF  S CL +S N   +     +P++ L  PP   +N
Sbjct: 28  FNVEKCHFGDSTCLVRSINALIKHYPKGIPEIGL--PPLDAYN 68


>AE014134-3191|AAF53867.2|  476|Drosophila melanogaster CG10895-PA,
           isoform A protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 202 LEVTSSPNASSENVLYTVTLKTDDGGDVRFTCGTQELQDLVYKLKDL 342
           +++ S   +S   ++YT +  + D  +  FT G  E  DL+  L DL
Sbjct: 40  IKIKSLGTSSKYRIIYTHSSFSVDLNNDEFTAGRGEANDLILTLNDL 86


>AB007821-1|BAA28755.1|  476|Drosophila melanogaster long form of
           nuclear kinase protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 202 LEVTSSPNASSENVLYTVTLKTDDGGDVRFTCGTQELQDLVYKLKDL 342
           +++ S   +S   ++YT +  + D  +  FT G  E  DL+  L DL
Sbjct: 40  IKIKSLGTSSKYRIIYTHSSFSVDLNNDEFTAGRGEANDLILTLNDL 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,888,449
Number of Sequences: 53049
Number of extensions: 392021
Number of successful extensions: 887
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)