Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335F03f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 70 2e-13
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 67 1e-12
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 56 2e-09
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 56 3e-09
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 56 3e-09
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 54 1e-08
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 33 0.026
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 32 0.045
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 32 0.060
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 28 0.73
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 27 1.7
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 2.2
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 2.2
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 3.0
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 26 3.0
SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces pom... 26 3.9
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 25 5.2
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 25 5.2
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 6.8
SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual 25 9.0
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 9.0
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 70.1 bits (164), Expect = 2e-13
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +3
Query: 168 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 347
AEE + GN L+K ++ A+ Y E K P + +GNR+A Y+ + + + D K
Sbjct: 399 AEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCNK 458
Query: 348 AVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVECVSGE-LRALET 506
A+ LDP F K Y+R A+ L D A A+E+ E +G+ LR +E+
Sbjct: 459 AIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIES 512
Score = 67.3 bits (157), Expect = 1e-12
Identities = 41/100 (41%), Positives = 50/100 (50%)
Frame = +3
Query: 165 LAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQ 344
+AEE K GN + K+YK A+ + +AI L N Y NRSACY Y AL+DA
Sbjct: 1 MAEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDAT 60
Query: 345 KAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELG 464
K L P + KG+ R LGDL A R A E G
Sbjct: 61 KCTELKPDWAKGWSRKGAALHGLGDL----DAARSAYEEG 96
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 67.3 bits (157), Expect = 1e-12
Identities = 33/97 (34%), Positives = 54/97 (55%)
Frame = +3
Query: 168 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 347
AE+ K GN K+Y+ AL +Y +AI++ P + YY NR+A Y L ++ A+EDA
Sbjct: 83 AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALT 142
Query: 348 AVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATE 458
+SLDP + + R + ++LGD A ++ +
Sbjct: 143 CLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLD 179
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 56.4 bits (130), Expect = 2e-09
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 150 KSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPEN--AAYYGNRSACYMMLCMYK 323
+ P LAE++K GN YK K Y A+ Y EAI L ++ A YY NR+A YM + ++
Sbjct: 17 QEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFE 76
Query: 324 KALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLNGE 434
AL DA+++ + P K R + L L E
Sbjct: 77 LALCDAKQSDRIKPDVPKTQSRIRQAYEGLSILNEAE 113
Score = 54.0 bits (124), Expect = 1e-08
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Frame = +3
Query: 171 EEKKDSGNYLYKFKNYKGALAMYDEAIKLCPEN----AAYYGNRSACYMMLCMYKKALED 338
E K+ GN L++ NY+ A Y EA+++ P+N A Y NR+ + L ++AL D
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 339 AQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVEC-VSGELRALE 503
+ A+++D ++ KG AK AL + V+ A EL + + ELR L+
Sbjct: 284 SDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASDANLRQELRRLQ 339
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 56.0 bits (129), Expect = 3e-09
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +3
Query: 156 PESLAEEKKDSGNYLYKFKNYKGALAMYDEAI-KLCPEN---AAYYGNRSACYMMLCMYK 323
P +A+ ++ GN + K YK A Y +A+ + C + A Y NR+AC ++ Y+
Sbjct: 60 PHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYR 119
Query: 324 KALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVR 446
+ L D + + D T K Y R+AK +AL ++ +R
Sbjct: 120 QVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIR 160
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 56.0 bits (129), Expect = 3e-09
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +3
Query: 165 LAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQ 344
LA E K GN Y K Y A+ Y +AI C + ++ NR+ACY + +++ ++D
Sbjct: 150 LAAELKTLGNKAYGQKEYANAIDYYTQAIT-CSHDPIFFSNRAACYAAIGDFEQVIKDTS 208
Query: 345 KAVSLDPTFTKGYIRAAKCCIALGDL 422
+A+SLD ++ K R + LG L
Sbjct: 209 EALSLDSSYVKALNRRSAAYEQLGKL 234
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 54.0 bits (124), Expect = 1e-08
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = +3
Query: 168 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 347
A E K+ N K + A+ +Y +AI+L NA Y NRS ++ Y A+ DA K
Sbjct: 5 ALELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASK 64
Query: 348 AVSLDPTFTKGYIRAAKCCIAL 413
A+ DP + K Y R A IA+
Sbjct: 65 AIECDPEYAKAYFRRATAHIAI 86
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 33.1 bits (72), Expect = 0.026
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 162 SLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCP----ENAAYYGNRSACYMMLCMYKKA 329
+L EE++ +GN L++ ++ A+ + ++ P + NRS CY + K
Sbjct: 410 ALVEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTC 469
Query: 330 LEDAQKAVSL 359
L+D + V +
Sbjct: 470 LQDVDELVDI 479
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 32.3 bits (70), Expect = 0.045
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 150 KSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMML 311
+S ES+ +YL KF + ++ + D A+ CP NA+ SA +++L
Sbjct: 201 RSSESVENASNLISDYLKKFGKPRQSIELPDIAVDACPSNASRIQTLSAAWLLL 254
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 31.9 bits (69), Expect = 0.060
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Frame = +3
Query: 201 YKFKNYKGALAMYDEAIKL---CPENAAYYGNRS----ACYMMLCMYKKALEDAQKA--- 350
Y F N G L +A++ C + RS A Y LC+ +E A A
Sbjct: 930 YVFWNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALCIQNHDVECANAAFTR 989
Query: 351 -VSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATEL 461
+S+DP ++ ++ A C IA+G + Q + A E+
Sbjct: 990 SISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFEI 1027
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 210 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDP 365
K+YK AL YD A KL +++ ++ ++L + KAL + ++ ++ P
Sbjct: 547 KDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAP 598
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +3
Query: 237 YDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDPTFTKGYIRAAKCCIALG 416
+ A ++ P N+ Y YKKAL+ +A LD + + AK I L
Sbjct: 522 FQRAAEINPNNSVLITCIGMIYERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLH 581
Query: 417 D 419
D
Sbjct: 582 D 582
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +3
Query: 210 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLD 362
K+Y +L Y A+ + P N + + + + L +Y+ ++ + + LD
Sbjct: 90 KDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLD 140
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.6 bits (56), Expect = 2.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 195 YLYKFKNYKGALAMYDEAIKLCPENA----AYYGNRSACYMMLCMYKKALEDAQKAVSLD 362
Y+Y KNY+G + + + I+ ++ YY A Y + +KA+ QKA + D
Sbjct: 298 YVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRA-YHQMGNNEKAMASYQKAKAAD 356
Query: 363 PTFTKGYIRAAKCCIALGDLLNGEQAVRRATE 458
+ + I DL + + R E
Sbjct: 357 DRHLLSSVGIGQIQILQNDLTSAKLTFERIAE 388
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 198 LYKFKNYKGALAMYDEAIKLCPENA 272
L + K Y A+ YD+AIK P+NA
Sbjct: 644 LKRQKLYIKAIQSYDQAIKFDPKNA 668
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +3
Query: 189 GNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDPT 368
G +Y K Y+ + + +A++ P N + A +A+ +AVSL P
Sbjct: 445 GIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQ 504
Query: 369 FTKGYIRAAKCCIALG 416
+ + A I LG
Sbjct: 505 YVRVRSNMAVSNINLG 520
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 150 KSPESLAEEKKDSGNYLYKFKNYKGALA 233
++ E L EEK D + LY+F+ Y+ +A
Sbjct: 265 RNVEILKEEKNDLESKLYRFEEYRDKVA 292
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 147 PKSPESLA-EEKKDSGNYLYKFKNYKGALAMYDEAI 251
P S +S A E+ GN Y KNY+ A+ Y +A+
Sbjct: 24 PSSSDSRAIEQLVTQGNMAYAQKNYEEAVDKYGQAL 59
>SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 365 NIHQRIHTGCEMLYCVRRSIK 427
+IH R E +YC+RR IK
Sbjct: 124 HIHNRRLCWAEFIYCIRRGIK 144
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 175 KKKTVVIIYISLKITKEHWPCMMKPLNC 258
KK VV + L + E W C + P NC
Sbjct: 124 KKLPVVYCHHGLLMNSEVWVCNVDPRNC 151
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 517 NRLSVSNARNSPLTHSTPPNSVAR 446
N LS + NS +T TPPNS+ R
Sbjct: 818 NILSFLSFANSQVTSYTPPNSIDR 841
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 292 LHVT*CYACIRRLLKMHRKLYHWIQHSPKDT 384
LH++ +R L ++R+ Y W+ KDT
Sbjct: 273 LHMSVASIVLRNDLSLNRRFYAWLMGLSKDT 303
>SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 354 SLDPTF-TKGYIRAAKCCIALGDLLNGEQAV 443
+LDP TKG++R A+ I L + NG+ V
Sbjct: 134 TLDPIDGTKGFLRGAQYAICLALIENGKPVV 164
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 360 PMIQLSVHLQEPSYTCIASCNMQICCRNMLH 268
P L + + EP+ CI SC + N +H
Sbjct: 494 PFSGLCLDMNEPTSFCIGSCGSDLLKLNPVH 524
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,935,578
Number of Sequences: 5004
Number of extensions: 37535
Number of successful extensions: 142
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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