Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335F01f
         (464 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    36   0.019
U23173-1|AAC46708.1|  221|Caenorhabditis elegans Hypothetical pr...    34   0.058
Z81489-14|CAN86572.1|  420|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z81489-13|CAB04012.1|  426|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z81087-2|CAN86636.1|  420|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z81087-1|CAB03122.1|  426|Caenorhabditis elegans Hypothetical pr...    27   6.6  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 35.5 bits (78), Expect = 0.019
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +2

Query: 80  AGSSMMCFDDKTKRWSIMGVSAWRIACAKIGLGRPRIYDPVTSHVDWI 223
           +G  +MC  D    W + GV +W I CA+ G+  P +Y  V S   WI
Sbjct: 241 SGGPLMCARDG--HWELTGVVSWGIGCARPGM--PGVYGNVHSASTWI 284


>U23173-1|AAC46708.1|  221|Caenorhabditis elegans Hypothetical
           protein K07E1.1 protein.
          Length = 221

 Score = 33.9 bits (74), Expect = 0.058
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 124 PTLRFI-IKTHHRTSSIFFFLKVFFSVTSLFNKRFQFD 14
           P L F+ I+T     SIFFFL +FF    LF+  F FD
Sbjct: 22  PNLTFLPIETFFCEFSIFFFLNLFFPFFPLFSPAFSFD 59


>Z81489-14|CAN86572.1|  420|Caenorhabditis elegans Hypothetical
           protein F53E4.1b protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +2

Query: 86  SSMMCFDDKTKRWSIMGV-----SAWRIACAKIGLGRPRIY 193
           + + CFD KT  WS++ V     SA R  C+ +  G+  ++
Sbjct: 284 NELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLF 324


>Z81489-13|CAB04012.1|  426|Caenorhabditis elegans Hypothetical
           protein F53E4.1a protein.
          Length = 426

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +2

Query: 86  SSMMCFDDKTKRWSIMGV-----SAWRIACAKIGLGRPRIY 193
           + + CFD KT  WS++ V     SA R  C+ +  G+  ++
Sbjct: 290 NELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLF 330


>Z81087-2|CAN86636.1|  420|Caenorhabditis elegans Hypothetical
           protein F53E4.1b protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +2

Query: 86  SSMMCFDDKTKRWSIMGV-----SAWRIACAKIGLGRPRIY 193
           + + CFD KT  WS++ V     SA R  C+ +  G+  ++
Sbjct: 284 NELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLF 324


>Z81087-1|CAB03122.1|  426|Caenorhabditis elegans Hypothetical
           protein F53E4.1a protein.
          Length = 426

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +2

Query: 86  SSMMCFDDKTKRWSIMGV-----SAWRIACAKIGLGRPRIY 193
           + + CFD KT  WS++ V     SA R  C+ +  G+  ++
Sbjct: 290 NELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLF 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,985,818
Number of Sequences: 27780
Number of extensions: 200428
Number of successful extensions: 418
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)