Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335F01f
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    29   0.033
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   3.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.7  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   4.9  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   6.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 0.033
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +2

Query: 80  AGSSMMCFDDKTKRWSIMGVSAWRIACAKIGLGRPRIYDPVTSHVDWIRRTVSDS 244
           +G  ++  + +TKR   +G+ +W   C K   G  +    V S++DWI     D+
Sbjct: 349 SGGPVLWQNPRTKRLVNIGIISWGAECGKYPNGNTK----VGSYIDWIVSQTPDA 399


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 89  SMMCFDDKTKRWSIMGV 139
           +M C  DK  RW+++GV
Sbjct: 432 TMSC-SDKIARWNVLGV 447


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 275 YCKDCIN*SMFHSLFLI*YVDN 340
           +C++CI+ ++F  LF + Y ++
Sbjct: 34  FCRNCIHPTVFSVLFWLGYCNS 55


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 275 YCKDCIN*SMFHSLFLI*YVDN 340
           +C++CI+ ++F  LF + Y ++
Sbjct: 482 FCRNCIHPTVFSVLFWLGYCNS 503


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 263 RNLGYCKDCIN*SMFHSLFLI*YVDNFFKYSTALDV 370
           RN+G            SLF + Y+ NF  YS  +DV
Sbjct: 124 RNIGAVPKMATELYEESLF-VPYITNFIIYSKRMDV 158


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 282 LQYPRFLNYGHLAESETVLRIQST 211
           L+Y  ++ Y H  E + VL    T
Sbjct: 62  LEYELYIKYSHTHEKKLVLERSKT 85


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 275 YCKDCIN*SMFHSLFLI*YVDNFF 346
           YCK CI+   F  L  + Y ++ F
Sbjct: 297 YCKTCISGRAFQVLTWLGYSNSAF 320


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 44  CNRKKYFQEEEYA 82
           C+R  YF  EEY+
Sbjct: 118 CSRIDYFPNEEYS 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,593
Number of Sequences: 438
Number of extensions: 2416
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)