Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335E07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical p...    30   1.2  
AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical ...    30   1.2  
U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81070-4|CAB03003.2|  474|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   6.2  
Z30423-12|CAA83006.2|  486|Caenorhabditis elegans Hypothetical p...    27   8.1  
AF031935-1|AAB87066.1|  486|Caenorhabditis elegans UNC-47 protein.     27   8.1  

>Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -1

Query: 386 IASPSRPAEIMPLSQRTPKTTIFPSVKNSGAFNFNLIGLGSIFPDDAL 243
           + S      IM LSQ++     F S K+S   +FN   L S +P+D+L
Sbjct: 372 VRSSVEDRRIMNLSQQSFSNASFMSSKSSTPDDFNNTTLNSTYPEDSL 419


>AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -1

Query: 386 IASPSRPAEIMPLSQRTPKTTIFPSVKNSGAFNFNLIGLGSIFPDDAL 243
           + S      IM LSQ++     F S K+S   +FN   L S +P+D+L
Sbjct: 372 VRSSVEDRRIMNLSQQSFSNASFMSSKSSTPDDFNNTTLNSTYPEDSL 419


>U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical
           protein W03B1.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 124 ETGKNWY*RLSSVATSMTLAMIVV 53
           ET + WY +LSS +T+M +A++ V
Sbjct: 15  ETFEKWYLKLSSTSTAMLIAILFV 38


>Z81070-4|CAB03003.2|  474|Caenorhabditis elegans Hypothetical
           protein F26E4.5 protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 232 GETLRASSGKIEPSPIRLKLKAPEFLTEGNIVVFGVRWDSGI 357
           G   R  S K+  S     L+  E    G +VV  V WD G+
Sbjct: 94  GYMSREESEKLVRSQGEFLLRKTELTKRGEVVVLSVFWDEGV 135


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 198 SDPMYEVMIGGWGNAKSVIRKNRTK 272
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


>Z30423-12|CAA83006.2|  486|Caenorhabditis elegans Hypothetical
           protein T20G5.6 protein.
          Length = 486

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -2

Query: 349 YPNEPQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIGSDSCGPVVSAM 170
           YP  P    YSP   +   +++    LVLF L   L+ P    +   +G+ + G ++S +
Sbjct: 375 YPQTPFTSCYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNIT-GTMLSFI 433

Query: 169 W 167
           W
Sbjct: 434 W 434


>AF031935-1|AAB87066.1|  486|Caenorhabditis elegans UNC-47 protein.
          Length = 486

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -2

Query: 349 YPNEPQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIGSDSCGPVVSAM 170
           YP  P    YSP   +   +++    LVLF L   L+ P    +   +G+ + G ++S +
Sbjct: 375 YPQTPFTSCYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNIT-GTMLSFI 433

Query: 169 W 167
           W
Sbjct: 434 W 434


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,761,150
Number of Sequences: 27780
Number of extensions: 234768
Number of successful extensions: 623
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)