Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335E03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    24   1.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.7  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 69  LFGDSNIDMTM-SLKHQILKRQIGSSLSPYV 158
           L+   N D  M +L   I+ R++GSS+SP V
Sbjct: 11  LYSSENFDDFMKALGVGIMTRKVGSSVSPVV 41


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 322 PQSRRSPDTVPAQSQPVSLVRYKP 393
           P+ RR P+  P  ++PV + + +P
Sbjct: 114 PRLRREPEAEPGNNRPVYIPQPRP 137



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 322 PQSRRSPDTVPAQSQPVSLVRYKP 393
           P+ RR P+  P  ++PV + + +P
Sbjct: 140 PRLRREPEAEPGNNRPVYIPQPRP 163


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 369 RLGLRWDCVGTASGLRWDC 313
           +L L+W  V   SG+ +DC
Sbjct: 267 KLELKWFAVPAVSGMVFDC 285



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 374 ETGWDCAGTVSGLRRDCGG 318
           E  W     VSG+  DCGG
Sbjct: 269 ELKWFAVPAVSGMVFDCGG 287


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 146 IAICMHEMGNITICICVY 199
           I I +   GNI +C+ +Y
Sbjct: 34  ILIFLSVAGNILVCVAIY 51


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 148 RHMYARNGKYHYMYLCLSNL-FNIFESA 228
           R  YA N   H++   LSNL  ++ E A
Sbjct: 27  RDTYALNQSLHFVRASLSNLDMSVLECA 54


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 148 RHMYARNGKYHYMYLCLSNL-FNIFESA 228
           R  YA N   H++   LSNL  ++ E A
Sbjct: 117 RDTYALNQSLHFVRASLSNLDMSVLECA 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,818
Number of Sequences: 438
Number of extensions: 2911
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)