Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335E02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M20705-1|AAA70215.1|  112|Drosophila melanogaster unknown protei...    28   6.7  
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    28   8.8  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    28   8.8  

>M20705-1|AAA70215.1|  112|Drosophila melanogaster unknown protein
           protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +2

Query: 2   KKIKKFVTSSRNTLTKVC 55
           K+ KKFV SSRNT T  C
Sbjct: 60  KRFKKFVISSRNTKTNEC 77


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 190 RSFLQRHMFQLQVVRNSVTNYIT*MNIF 107
           RS +QRH+  +  V+N +T+YI+  N F
Sbjct: 608 RSAVQRHVTTMHKVKNKLTDYISETNEF 635


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 190 RSFLQRHMFQLQVVRNSVTNYIT*MNIF 107
           RS +QRH+  +  V+N +T+YI+  N F
Sbjct: 608 RSAVQRHVTTMHKVKNKLTDYISETNEF 635


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,202,452
Number of Sequences: 53049
Number of extensions: 422361
Number of successful extensions: 839
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)