Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335E01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA ...    36   0.033
X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (d...    34   0.10 
AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p pro...    34   0.10 
AL021726-1|CAA16809.1| 1002|Drosophila melanogaster EG:171E4.1,F...    34   0.10 

>AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA
           protein.
          Length = 1002

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
 Frame = +3

Query: 192 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 350
           + +D   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDDEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 351 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIH 485
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIH 144


>X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (dor)
           protein.
          Length = 1002

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
 Frame = +3

Query: 192 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 350
           + ++   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDEEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 351 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIH 485
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIH 144


>AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p
           protein.
          Length = 1002

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
 Frame = +3

Query: 192 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 350
           + ++   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDEEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 351 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIH 485
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIH 144


>AL021726-1|CAA16809.1| 1002|Drosophila melanogaster
           EG:171E4.1,FBgn0000482;dor protein.
          Length = 1002

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
 Frame = +3

Query: 192 QLEDNVPMFTKQKMNLN-PSDL---ITHAAVSSDNLVVAMANGK---LFRMDIRNPDSEQ 350
           + ++   +F++ KM L  PS+    + H AVS + LV  +   +   L R  +       
Sbjct: 37  ETDEEDEIFSRHKMVLRVPSNCTGDLMHLAVSRNWLVCLLGTPERTTLLRFFLPRAIPPG 96

Query: 351 EIHYSKYCQPTS-KLSGLFLDPLGCHLLMSF--SSKTKDGCPELAYIH 485
           E    KY   +  K++ +FLDP G H++++    S T    P+  YIH
Sbjct: 97  EAVLEKYLSGSGYKITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIH 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,192,851
Number of Sequences: 53049
Number of extensions: 436030
Number of successful extensions: 1156
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)