Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335E01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    31   0.50 
AC006632-10|AAK85471.1|  293|Caenorhabditis elegans Hypothetical...    29   1.5  
Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z73422-6|CAH04641.1|  316|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical p...    27   6.2  
AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 183 INMQLEDNVPMFTKQKMNLNPSDLITHAAVSSDNLVVAM 299
           I  +LED V   TK   +LNPS L+T      D L+V +
Sbjct: 255 IIQKLEDEVDYLTKNLESLNPSQLVTSLENKDDYLLVTV 293


>AC006632-10|AAK85471.1|  293|Caenorhabditis elegans Hypothetical
           protein F28A10.5 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +3

Query: 168 ISSGYINMQLED-NVPMFTKQKMNLNPSDLIT-HAA 269
           I+S  IN +LE  ++P FT+Q   LNP+ L T H+A
Sbjct: 27  ITSNQINRKLEQCSLPSFTRQARVLNPAALYTSHSA 62


>Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical
           protein F25H8.6 protein.
          Length = 599

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 147 KPPAEPMISSGYINM-----QLEDNVPMFTKQKMNLNPSDL 254
           KPPA P  S+  +N+     Q ++  PMF  Q +   P+D+
Sbjct: 260 KPPAPPTPSNSILNLSQSQNQCQNQNPMFQSQNIKNEPTDV 300


>Z73422-6|CAH04641.1|  316|Caenorhabditis elegans Hypothetical
           protein B0564.11 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 372 CQPTSKLSGLFLDPLGCHLL 431
           C P S   G+ L P GCH++
Sbjct: 241 CSPNSSTMGIVLIPCGCHVM 260


>Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 264 AAVSSDNLVVAMANGKLFRMDIRNPDSEQEIHYSKYCQPTSKLSG 398
           A VSS  L    A  K+ +MD +  D  Q++HY  Y Q  S L G
Sbjct: 23  ACVSSSKL---SAMDKM-KMDSKEVDKLQQLHYGWYIQAVSSLLG 63


>Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 264 AAVSSDNLVVAMANGKLFRMDIRNPDSEQEIHYSKYCQPTSKLSG 398
           A VSS  L    A  K+ +MD +  D  Q++HY  Y Q  S L G
Sbjct: 23  ACVSSSKL---SAMDKM-KMDSKEVDKLQQLHYGWYIQAVSSLLG 63


>Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 264 AAVSSDNLVVAMANGKLFRMDIRNPDSEQEIHYSKYCQPTSKLSG 398
           A VSS  L    A  K+ +MD +  D  Q++HY  Y Q  S L G
Sbjct: 23  ACVSSSKL---SAMDKM-KMDSKEVDKLQQLHYGWYIQAVSSLLG 63


>Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 264 AAVSSDNLVVAMANGKLFRMDIRNPDSEQEIHYSKYCQPTSKLSG 398
           A VSS  L    A  K+ +MD +  D  Q++HY  Y Q  S L G
Sbjct: 23  ACVSSSKL---SAMDKM-KMDSKEVDKLQQLHYGWYIQAVSSLLG 63


>AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical
           protein K09F6.10 protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
 Frame = +2

Query: 17  KCNVY----HRAIITVRCRRCSYTNC 82
           KCN Y    H      +CRRC  TNC
Sbjct: 335 KCNQYSGRRHYQTCGAKCRRCGVTNC 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,658,556
Number of Sequences: 27780
Number of extensions: 231906
Number of successful extensions: 594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)