Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335D12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   0.50 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   3.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   4.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.2  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   6.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.2  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   8.2  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 443 CRALGEISACCCFQFTLSHALGHAHAEQLSL 351
           C  L E S CC F    +  L  + A+QLS+
Sbjct: 815 CLILAEDSECCSFSGVSNAGLSRSSAKQLSM 845


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/13 (69%), Positives = 11/13 (84%), Gaps = 1/13 (7%)
 Frame = +2

Query: 467 PSHHA-RGSQPHR 502
           P HHA RG++PHR
Sbjct: 835 PKHHASRGAKPHR 847


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 406  KQQQALISPSARHSVPYVASTIAPRARLTTSP 501
            +QQQ       +H  P   + + P A L TSP
Sbjct: 1314 QQQQQQQQQQQQHQPPSTQAQLRPSAPLNTSP 1345


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = -1

Query: 389 HALGHAHAEQLSLVAPCHHTHRCAVSH 309
           H L H H    +     HH H  A  H
Sbjct: 707 HHLSHHHGGAAAATGHHHHQHHAAPHH 733


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 418 ALISPSARHSVPYVASTI 471
           A  +P ARHS+P V  ++
Sbjct: 189 AAATPKARHSIPEVVKSV 206


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 418 ALISPSARHSVPYVASTIAPRARLTTSPILIEL 516
           A + PS       + ST+  R + T +PIL +L
Sbjct: 551 AQLKPSFAPGPDGIPSTVLKRCQTTVAPILAKL 583


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/39 (23%), Positives = 22/39 (56%)
 Frame = +1

Query: 388 WLNVNWKQQQALISPSARHSVPYVASTIAPRARLTTSPI 504
           W+ V +  +   ++   +H+V    +T+AP++  TT+ +
Sbjct: 95  WVYVQFANEGYWLTDK-KHTVTRTKATVAPKSTTTTTTV 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,832
Number of Sequences: 2352
Number of extensions: 7187
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)