Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335D07f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens ... 160 2e-39
AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition part... 159 7e-39
BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein. 128 2e-29
AK027320-1|BAB55040.1| 327|Homo sapiens protein ( Homo sapiens ... 56 8e-08
AK027322-1|BAB55041.1| 335|Homo sapiens protein ( Homo sapiens ... 46 8e-05
BC030547-1|AAH30547.1| 647|Homo sapiens hypothetical protein DK... 33 0.46
BC018769-1|AAH18769.1| 556|Homo sapiens Unknown (protein for IM... 33 0.46
BC009436-1|AAH09436.1| 610|Homo sapiens Unknown (protein for IM... 33 0.46
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 33 0.61
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 31 1.9
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 31 1.9
AY779755-1|AAV31776.1| 159|Homo sapiens truncated nuclear facto... 30 4.3
U81787-1|AAB51685.1| 389|Homo sapiens Wnt10B protein. 29 7.5
BC130330-1|AAI30331.1| 492|Homo sapiens fascin homolog 2, actin... 29 7.5
BC126295-1|AAI26296.1| 492|Homo sapiens fascin homolog 2, actin... 29 7.5
BC096356-1|AAH96356.1| 389|Homo sapiens wingless-type MMTV inte... 29 7.5
BC096354-1|AAH96354.1| 389|Homo sapiens wingless-type MMTV inte... 29 7.5
BC096353-1|AAH96353.1| 389|Homo sapiens wingless-type MMTV inte... 29 7.5
AF066065-1|AAC18604.1| 492|Homo sapiens retinal fascin protein. 29 7.5
AF030165-1|AAB86481.1| 492|Homo sapiens retinal fascin protein. 29 7.5
AF028700-1|AAC39549.1| 116|Homo sapiens Wnt10B protein. 29 7.5
AB070724-1|BAB72181.1| 389|Homo sapiens WNT10B protein. 29 7.5
BX679664-5|CAH71325.1| 891|Homo sapiens WD repeat domain 47 pro... 29 9.9
BX679664-4|CAH71327.1| 919|Homo sapiens WD repeat domain 47 pro... 29 9.9
BX679664-3|CAH71326.1| 920|Homo sapiens WD repeat domain 47 pro... 29 9.9
BC068499-1|AAH68499.1| 351|Homo sapiens THO complex 3 protein. 29 9.9
BC066325-1|AAH66325.1| 327|Homo sapiens THOC3 protein protein. 29 9.9
BC039254-1|AAH39254.1| 893|Homo sapiens WDR47 protein protein. 29 9.9
BC034964-1|AAH34964.1| 920|Homo sapiens WD repeat domain 47 pro... 29 9.9
BC033684-1|AAH33684.1| 437|Homo sapiens carboxypeptidase A6 pro... 29 9.9
BC006849-1|AAH06849.1| 351|Homo sapiens THO complex 3 protein. 29 9.9
AL449266-4|CAI14352.1| 891|Homo sapiens WD repeat domain 47 pro... 29 9.9
AL449266-3|CAI14353.1| 919|Homo sapiens WD repeat domain 47 pro... 29 9.9
AL449266-2|CAI14351.1| 920|Homo sapiens WD repeat domain 47 pro... 29 9.9
AB020700-1|BAA74916.2| 974|Homo sapiens KIAA0893 protein protein. 29 9.9
>AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ90217 fis, clone MAMMA1002234, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 627
Score = 160 bits (389), Expect = 2e-39
Identities = 77/179 (43%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Frame = +3
Query: 3 HLVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWREAADSLQ 182
HL+SRL+KA H + L +LCE S R +A+T LEA AY ++L G+L E Q+W+ A ++
Sbjct: 154 HLLSRLRKAVKHAEELERLCE-SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFN 212
Query: 183 RARIVLEQLCTALPADERIVYDQKLEELKPSLRYCAYNIGDESAAGDLMAMR-----GQG 347
+ + + E+L +A ++ ++Y+Q++EE+ P++RYCAYNIGD+SA +LM MR +G
Sbjct: 213 KCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGGTEG 272
Query: 348 LM-HNLDALMAQAKESRSGIMHEVEWRGRRVTVKPEKVRLFLIALQDLDKSVSKAETAQ 521
L+ L+AL+ Q + ++ M EVEWRGR V VK +KVR+FL+ L D + ++ +AE+ +
Sbjct: 273 LLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAESEE 331
>AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition
particle 68 protein.
Length = 619
Score = 159 bits (385), Expect = 7e-39
Identities = 76/179 (42%), Positives = 123/179 (68%), Gaps = 6/179 (3%)
Frame = +3
Query: 3 HLVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWREAADSLQ 182
HL+SRL+KA H + L +LC+ S R +A+T LEA AY ++L G+L E Q+W+ A ++
Sbjct: 146 HLLSRLRKAVKHAEELERLCK-SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFN 204
Query: 183 RARIVLEQLCTALPADERIVYDQKLEELKPSLRYCAYNIGDESAAGDLMAMR-----GQG 347
+ + + E+L +A ++ ++Y+Q++EE+ P++RYCAYNIGD+SA +LM MR +G
Sbjct: 205 KCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGGTEG 264
Query: 348 LM-HNLDALMAQAKESRSGIMHEVEWRGRRVTVKPEKVRLFLIALQDLDKSVSKAETAQ 521
L+ L+AL+ Q + ++ M EVEWRGR V VK +KVR+FL+ L D + ++ +AE+ +
Sbjct: 265 LLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAESEE 323
>BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein.
Length = 596
Score = 128 bits (308), Expect = 2e-29
Identities = 67/173 (38%), Positives = 107/173 (61%)
Frame = +3
Query: 3 HLVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWREAADSLQ 182
HL+SRL+KA H + L +LCE S R +A+T LEA AY ++L G+L E Q+W+ A ++
Sbjct: 154 HLLSRLRKAVKHAEELERLCE-SNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFN 212
Query: 183 RARIVLEQLCTALPADERIVYDQKLEELKPSLRYCAYNIGDESAAGDLMAMRGQGLMHNL 362
+ + + E+L +A ++ ++Y+Q++EE+ P++RYCAYNIGD+SA
Sbjct: 213 KCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSA---------------- 256
Query: 363 DALMAQAKESRSGIMHEVEWRGRRVTVKPEKVRLFLIALQDLDKSVSKAETAQ 521
++ M EVEWRGR V VK +KVR+FL+ L D + ++ +AE+ +
Sbjct: 257 ---------KQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAESEE 300
>AK027320-1|BAB55040.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ14414 fis, clone HEMBA1004847, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 327
Score = 56.0 bits (129), Expect = 8e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3
Query: 348 LMHNLDALMAQAKESRSGIMHEVEWRGRRVTVKPEKVRLFLIALQDLDKSVSKAETAQ 521
L L+AL+ Q + ++ M EVEWRGR V VK +KVR+FL+ L D + ++ +AE+ +
Sbjct: 14 LAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAESEE 71
>AK027322-1|BAB55041.1| 335|Homo sapiens protein ( Homo sapiens
cDNA FLJ14416 fis, clone HEMBA1005202, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 335
Score = 46.0 bits (104), Expect = 8e-05
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +3
Query: 405 MHEVEWRGRRVTVKPEKVRLFLIALQDLDKSVSKAETAQ 521
M EVEWRGR V VK +KVR+FL+ L D + ++ +AE+ +
Sbjct: 1 MSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIVQAESEE 39
>BC030547-1|AAH30547.1| 647|Homo sapiens hypothetical protein
DKFZp434K1815 protein.
Length = 647
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 106 ARTLLGC-GACCCWSCN-NGARQRTHCNGPGSYSNNSVQPCRRTNGL 240
AR L GC G CCCW + ++R C +S S RR +GL
Sbjct: 457 ARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFSEGSEASGRRVDGL 503
>BC018769-1|AAH18769.1| 556|Homo sapiens Unknown (protein for
IMAGE:4648757) protein.
Length = 556
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 106 ARTLLGC-GACCCWSCN-NGARQRTHCNGPGSYSNNSVQPCRRTNGL 240
AR L GC G CCCW + ++R C +S S RR +GL
Sbjct: 366 ARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFSEGSEASGRRVDGL 412
>BC009436-1|AAH09436.1| 610|Homo sapiens Unknown (protein for
IMAGE:3502080) protein.
Length = 610
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 106 ARTLLGC-GACCCWSCN-NGARQRTHCNGPGSYSNNSVQPCRRTNGL 240
AR L GC G CCCW + ++R C +S S RR +GL
Sbjct: 420 ARLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFSEGSEASGRRVDGL 466
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -2
Query: 232 SSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSC 53
SS + S SS+ + + S++S SSSN+ S + +P+SS+ +S P SS S
Sbjct: 76 SSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSS 135
Query: 52 KS 47
S
Sbjct: 136 PS 137
Score = 31.9 bits (69), Expect = 1.4
Identities = 36/152 (23%), Positives = 65/152 (42%)
Frame = -2
Query: 511 SALDTDLSRSCRAIRKSRTFSGLTVTRRPRHSTSCIMPERDSLACAISASRLCMSP*PRM 332
+AL + SRS + +S S + + P S+S P + + S+S SP
Sbjct: 28 NALGSGGSRSSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSS 87
Query: 331 AIRSPAADSSPML*AQ*RRLGXXXXXXXX*TIRSSAGKAVQSCSSTILARCNESAASRHC 152
+ SP++ SS + SS+ + S SS+ + + S++S
Sbjct: 88 STSSPSSSSSS---------SSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSS 138
Query: 151 CNSSSNTPRSQEAYAPASSTVRASHLPLSSQS 56
+SSS++ S + +P+SS+ +S S S
Sbjct: 139 SSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSS 170
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = -2
Query: 232 SSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSC 53
SS+ + S S+ + + S++S +SSS++ S + +P+SS+ +S P SS S
Sbjct: 94 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 153
Query: 52 KS 47
S
Sbjct: 154 PS 155
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Frame = -2
Query: 511 SALDTDLSRSCRAIRKSRTFSGLTVTRRPRHSTSCIMPERDSLACAISASRLCMSP*PRM 332
+AL + SRS + +S S + + P S+S P + + S+S SP
Sbjct: 28 NALGSGGSRSSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSS 87
Query: 331 AIRSPAADSSPML*AQ*RRLGXXXXXXXX*TIRSSAGKAVQSCSSTILARCNESAASRHC 152
+ SP++ SS + + SS+ + S SS+ + + S++S
Sbjct: 88 STSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPS 147
Query: 151 CNSSS----NTPRSQEAYAPASSTVRAS-HLPLSSQSCKS 47
+SSS ++ S + +P+SS+ +S P SS S S
Sbjct: 148 SSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPS 187
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 70 AAGAKRVRC*RRARTLLGCGACCCWSCNNGARQRTHCNGPGSYSNNSVQPC 222
+ G + C + GCG+CC SC N ++ C P ++ +PC
Sbjct: 136 SCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCKPC 186
>AY779755-1|AAV31776.1| 159|Homo sapiens truncated nuclear factor
of kappa light polypeptide gene enhancer in B-cells in
protein.
Length = 159
Score = 30.3 bits (65), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 139 CWSCNNGARQRTHCNGPGSYSNNSV 213
CWS GAR+RT G ++SN V
Sbjct: 52 CWSGGGGARRRTRLGGSAAHSNRWV 76
>U81787-1|AAB51685.1| 389|Homo sapiens Wnt10B protein.
Length = 389
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 76 GAKRVRC*RRARTLLGCGACCCWSCNNGARQ----RTHC 180
G + C + +R L GCG+ CC +N RQ R HC
Sbjct: 328 GTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHC 366
>BC130330-1|AAI30331.1| 492|Homo sapiens fascin homolog 2,
actin-bundling protein, retinal (Strongylocentrotus
purpuratu protein.
Length = 492
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 375 AQAKESRSGIMHEVEWRGRRVTVKPEKVR 461
A A + + M E+EWRGRRV +K R
Sbjct: 323 ATATQVSANTMFEMEWRGRRVALKASNGR 351
>BC126295-1|AAI26296.1| 492|Homo sapiens fascin homolog 2,
actin-bundling protein, retinal (Strongylocentrotus
purpuratu protein.
Length = 492
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 375 AQAKESRSGIMHEVEWRGRRVTVKPEKVR 461
A A + + M E+EWRGRRV +K R
Sbjct: 323 ATATQVSANTMFEMEWRGRRVALKASNGR 351
>BC096356-1|AAH96356.1| 389|Homo sapiens wingless-type MMTV
integration site family, member 10B protein.
Length = 389
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 76 GAKRVRC*RRARTLLGCGACCCWSCNNGARQ----RTHC 180
G + C + +R L GCG+ CC +N RQ R HC
Sbjct: 328 GTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHC 366
>BC096354-1|AAH96354.1| 389|Homo sapiens wingless-type MMTV
integration site family, member 10B protein.
Length = 389
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 76 GAKRVRC*RRARTLLGCGACCCWSCNNGARQ----RTHC 180
G + C + +R L GCG+ CC +N RQ R HC
Sbjct: 328 GTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHC 366
>BC096353-1|AAH96353.1| 389|Homo sapiens wingless-type MMTV
integration site family, member 10B protein.
Length = 389
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 76 GAKRVRC*RRARTLLGCGACCCWSCNNGARQ----RTHC 180
G + C + +R L GCG+ CC +N RQ R HC
Sbjct: 328 GTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHC 366
>AF066065-1|AAC18604.1| 492|Homo sapiens retinal fascin protein.
Length = 492
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 375 AQAKESRSGIMHEVEWRGRRVTVKPEKVR 461
A A + + M E+EWRGRRV +K R
Sbjct: 323 ATATQVSANTMFEMEWRGRRVALKASNGR 351
>AF030165-1|AAB86481.1| 492|Homo sapiens retinal fascin protein.
Length = 492
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 375 AQAKESRSGIMHEVEWRGRRVTVKPEKVR 461
A A + + M E+EWRGRRV +K R
Sbjct: 323 ATATQVSANTMFEMEWRGRRVALKASNGR 351
>AF028700-1|AAC39549.1| 116|Homo sapiens Wnt10B protein.
Length = 116
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 76 GAKRVRC*RRARTLLGCGACCCWSCNNGARQ----RTHC 180
G + C + +R L GCG+ CC +N RQ R HC
Sbjct: 76 GTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHC 114
>AB070724-1|BAB72181.1| 389|Homo sapiens WNT10B protein.
Length = 389
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +1
Query: 76 GAKRVRC*RRARTLLGCGACCCWSCNNGARQ----RTHC 180
G + C + +R L GCG+ CC +N RQ R HC
Sbjct: 328 GTRGRACNKTSRLLDGCGSLCCGRGHNVLRQTRVERCHC 366
>BX679664-5|CAH71325.1| 891|Homo sapiens WD repeat domain 47
protein.
Length = 891
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 768 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 805
>BX679664-4|CAH71327.1| 919|Homo sapiens WD repeat domain 47
protein.
Length = 919
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 796 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 833
>BX679664-3|CAH71326.1| 920|Homo sapiens WD repeat domain 47
protein.
Length = 920
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 797 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 834
>BC068499-1|AAH68499.1| 351|Homo sapiens THO complex 3 protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 425 GPSRHCQTGKGSTFPYCSTGSGQIR 499
GPS Q+G GS P+CS SG R
Sbjct: 9 GPSALGQSGPGSMAPWCSVSSGPSR 33
>BC066325-1|AAH66325.1| 327|Homo sapiens THOC3 protein protein.
Length = 327
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 425 GPSRHCQTGKGSTFPYCSTGSGQIR 499
GPS Q+G GS P+CS SG R
Sbjct: 9 GPSALGQSGPGSMAPWCSVSSGPSR 33
>BC039254-1|AAH39254.1| 893|Homo sapiens WDR47 protein protein.
Length = 893
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 770 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 807
>BC034964-1|AAH34964.1| 920|Homo sapiens WD repeat domain 47
protein.
Length = 920
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 797 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 834
>BC033684-1|AAH33684.1| 437|Homo sapiens carboxypeptidase A6
protein.
Length = 437
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2
Query: 184 RCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSSQSCKSICPCAHAFFSRDT 8
RC ESAA + N+ + + Y PAS+T+ S + K+ P A AF RDT
Sbjct: 345 RCVESAAYK-AVNALQSVYGVRYRYGPASTTLYVSSGSSMDWAYKNGIPYAFAFELRDT 402
>BC006849-1|AAH06849.1| 351|Homo sapiens THO complex 3 protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 425 GPSRHCQTGKGSTFPYCSTGSGQIR 499
GPS Q+G GS P+CS SG R
Sbjct: 9 GPSALGQSGPGSMAPWCSVSSGPSR 33
>AL449266-4|CAI14352.1| 891|Homo sapiens WD repeat domain 47
protein.
Length = 891
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 768 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 805
>AL449266-3|CAI14353.1| 919|Homo sapiens WD repeat domain 47
protein.
Length = 919
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 796 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 833
>AL449266-2|CAI14351.1| 920|Homo sapiens WD repeat domain 47
protein.
Length = 920
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 797 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 834
>AB020700-1|BAA74916.2| 974|Homo sapiens KIAA0893 protein protein.
Length = 974
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 116 FLAAGRVAAGVATMARGSGLIATGQDRTRTTLYSLAGGR 232
F G A VA G L+ATGQ+ + LY + GGR
Sbjct: 851 FHGTGSAVASVAVDPSGR-LLATGQEDSSCMLYDIRGGR 888
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,128,367
Number of Sequences: 237096
Number of extensions: 1734149
Number of successful extensions: 6329
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6306
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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