Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335D07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical pr... 91 6e-19
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 33 0.16
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.38
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 31 0.38
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 31 0.38
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 31 0.66
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 31 0.66
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.2
U55774-2|AAA98009.3| 380|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.7
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 29 2.7
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 4.7
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 4.7
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 27 6.2
U97408-3|AAB93343.1| 339|Caenorhabditis elegans Hypothetical pr... 27 6.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 27 6.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 27 6.2
>Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical
protein F55C5.8 protein.
Length = 622
Score = 90.6 bits (215), Expect = 6e-19
Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Frame = +3
Query: 6 LVSRLKKACAHGQMLLQLCEESGRCEARTVLEAGAYASWLRGVLLLELQQWREAADSLQR 185
+++ L+KA H L ++ +ES R +A T LEA AYA+W+RG+ E + W++A++SL+
Sbjct: 124 MINSLRKAVLHATNLEKIVQESERFDAPTKLEAQAYAAWMRGMCSFESRNWQKASESLKL 183
Query: 186 ARIVLEQLCTAL-PADERIVYDQKLEELKPSLRYCAYNIGDESAA----GDLMAMR---G 341
A+ V E+L A ++ + E++P LR C +NI + A +LM +R G
Sbjct: 184 AKTVYEKLAEATNNTTLSSIFKGRCREIQPQLRLCEFNIAESPGAVGTMTELMELRMQMG 243
Query: 342 QGLMHNLDALMAQAKES-RSGIMHEVEWRGRRVTVKPEKVRLFLIALQDLDKSVSKAET 515
+G ++D L+++ + S S + +EW G + TV EK + + + + +++ +T
Sbjct: 244 EGGDSSVDKLISEMRASATSAEVVTIEWGGAKSTVDDEKAKQVVQEWKQTEVELAQCQT 302
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/68 (20%), Positives = 29/68 (42%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLSS 62
T + A + +C + +C + + C ++ + ++ Y PA + S +P
Sbjct: 78 TYQVQASQCAPACQQSCQMQCQSAPSVSQCQSTCQQSCQASSCYTPAPVQCQPSCMPACK 137
Query: 61 QSCKSICP 38
QSC + P
Sbjct: 138 QSCVAPAP 145
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 211 QSCSSTILARCNESAASRHCCNSSSN----TPRSQEAYAPASSTVRASH-----LPLSSQ 59
Q+C +T L CN S + C +++SN TP + + ST ++ +P Q
Sbjct: 195 QTCQNTCLGSCN-SCSGGGCNSNNSNLVVVTPCERSCNSGCRSTCSSTSTLSVCIPACQQ 253
Query: 58 SCKSICPCAHAF 23
+C+S C A F
Sbjct: 254 TCRSTCSTAKTF 265
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLP 71
T + A + +C + +C + + +C +S T ++ Y APA + S +P
Sbjct: 76 TYQVQATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMP 135
Query: 70 LSSQSCKSICP 38
+ QSC + P
Sbjct: 136 VCEQSCVAPAP 146
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLP 71
T + A + +C + +C + + +C +S T ++ Y APA + S +P
Sbjct: 76 TYQVQATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMP 135
Query: 70 LSSQSCKSICP 38
+ QSC + P
Sbjct: 136 VCEQSCVAPAP 146
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 30.7 bits (66), Expect = 0.66
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLP 71
T + A + +C + +C + + +C +S T ++ Y APA + S +P
Sbjct: 76 TYQVQATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMP 135
Query: 70 LSSQSCKSICP 38
QSC + P
Sbjct: 136 ACEQSCVAPAP 146
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 30.7 bits (66), Expect = 0.66
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY---APASSTVRASHLP 71
T + A + +C + +C + + +C +S T ++ Y APA + S +P
Sbjct: 76 TYQVQATQCAPACQQSCQRQCQSAPSVSNCQSSCQQTCQTSSCYTPVAPAPVQCQPSCMP 135
Query: 70 LSSQSCKSICP 38
QSC + P
Sbjct: 136 ACEQSCVAPAP 146
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 43 RCFCSFVRKAAGAKRVRC*RRARTLLGCGACCCWSCNNGARQR 171
+C C+ R + C R GCG CC C G R+R
Sbjct: 82 KCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCC-GCGGGGRKR 123
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 43 RCFCSFVRKAAGAKRVRC*RRARTLLGCGACCCWSCNNGARQR 171
+C C+ R + C R GCG CC C G R+R
Sbjct: 85 KCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCC-GCGGGGRKR 126
>U55774-2|AAA98009.3| 380|Caenorhabditis elegans Hypothetical
protein F35G8.1 protein.
Length = 380
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 389 LFSLCHQRIEVVHESLTAHGHKVSGGGLVTDVVSTITKTRLQLL*LLIV 243
L SLCH RI V+ + T + VT K RLQ L L +V
Sbjct: 203 LISLCHWRIAVILNTQTKKFQTLRSASTVTQSTDIRRKQRLQTLLLAMV 251
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 226 AGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLS-SQSCK 50
A K QSC S +++ N +A+ + CN+ + S ++ + ++ Q+C+
Sbjct: 212 APKCTQSCHSQCISQGNPAASCSNSCNTECSDKCSTRPVQAQVQQIQPQQVQITIPQTCQ 271
Query: 49 SIC 41
S C
Sbjct: 272 SRC 274
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 124 CGACCCWSCNNGARQRTHCNGPGSYSNNSVQPCRRTN 234
CG C C N G + CN PG + + C+RTN
Sbjct: 496 CGVCRCKGGNVG--KYCECNRPGMSTAALNEKCKRTN 530
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 124 CGACCCWSCNNGARQRTHCNGPGSYSNNSVQPCRRTN 234
CG C C N G + CN PG + + C+RTN
Sbjct: 496 CGVCRCKGGNVG--KYCECNRPGMSTAALNEKCKRTN 530
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY----APASSTVRASHL 74
T + + +C + +C + + C +S T ++ Y APA + S +
Sbjct: 74 TYQVQTSQCAPACQQSCQNQCQFAPSMNECQSSCQQTCQTSSCYTQIAAPAPVQCQPSCM 133
Query: 73 PLSSQSCKSICP 38
P QSC + P
Sbjct: 134 PACEQSCVAPAP 145
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = -2
Query: 241 TIRSSAGKAVQSCSSTILARCNESAASRHCCNSSSNTPRSQEAY----APASSTVRASHL 74
T + + +C + +C + + C +S T ++ Y APA + S +
Sbjct: 75 TYQVQTSQCAPACQQSCQNQCQFAPSMNECQSSCQQTCQTSSCYTQIAAPAPVQCQPSCM 134
Query: 73 PLSSQSCKSICP 38
P QSC + P
Sbjct: 135 PACEQSCVAPAP 146
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 43 RCFCSFVRKAAGAKRVRC*RRARTLLGCGACCCWSCNNGARQR 171
RC C+ R + C R GCG CC C G R+R
Sbjct: 97 RC-CTCCRTCCCTRCCTCCRPCCCGCGCGCGCC-GCGGGGRKR 137
>U97408-3|AAB93343.1| 339|Caenorhabditis elegans Hypothetical
protein F48A9.1 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 318 RRRTRHRCCKHNNEDSASAPLASDRKQSVRPPAR 217
R R HR K +N D AS S R +S+ P +R
Sbjct: 242 RERYHHRRSKSSNRDDASVSHRSLRHRSMSPASR 275
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 43 RCFCSFVRKAAGAKRVRC*RRARTLLGCGACCCWSCNNGARQR 171
RC C+ R + C R GCG CC C G R+R
Sbjct: 98 RC-CTCCRTCCCTRCCTCCRPCCCGCGCGCGCC-GCGGGGRKR 138
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 43 RCFCSFVRKAAGAKRVRC*RRARTLLGCGACCCWSCNNGARQR 171
RC C+ R + C R GCG CC C G R+R
Sbjct: 98 RC-CTCCRTCCCTRCCTCCRPCCCGCGCGCGCC-GCGGGGRKR 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,471,593
Number of Sequences: 27780
Number of extensions: 252256
Number of successful extensions: 955
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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