Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335D07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    27   0.12 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   0.82 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   1.4  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   3.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.8  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 130 ACCCWSCNNGARQRTHCNGPGSYSNNSV 213
           +CCCW C+N         GPGS S   V
Sbjct: 10  SCCCWCCDN-------LGGPGSSSAGGV 30


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 481 CRAIRKSRTFSGLTVTRRPRHSTSCIM 401
           C  IR+S     L V R  RHS SC +
Sbjct: 331 CDEIRESLDTQFLQVCRSRRHSDSCCL 357


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -2

Query: 220 KAVQSCSSTILARCNESAASRHCCNSSSN 134
           K +Q C    L+  N+      CCNS  N
Sbjct: 141 KNLQCCGVHSLSDYNDKPIPASCCNSPEN 169


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -2

Query: 55  CKS-ICPCAHAFFSRDTR 5
           C S I PC +A FS+D R
Sbjct: 53  CNSAINPCIYALFSKDFR 70


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -2

Query: 55  CKS-ICPCAHAFFSRDTR 5
           C S I PC +A FS+D R
Sbjct: 501 CNSAINPCIYALFSKDFR 518



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/46 (21%), Positives = 23/46 (50%)
 Frame = -2

Query: 202 SSTILARCNESAASRHCCNSSSNTPRSQEAYAPASSTVRASHLPLS 65
           + T+  +CN    +   C+ +S    + + ++    T R++HL +S
Sbjct: 348 TETLNTKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVS 393


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 151 NNGARQRTHCNGPGSYSNNSVQPC 222
           NNGA    + NG  + +NN    C
Sbjct: 251 NNGANDNGNGNGASNNNNNGDMFC 274


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 233 TDCLRSEARGAEAESSL 283
           TDCLRSE   A+ ES++
Sbjct: 172 TDCLRSEL--AQCESNI 186


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 223 GKAVQSCSSTILARCNESAASRHCCNSSSNT 131
           GKA+  C +  +  CN    +    +SSS T
Sbjct: 705 GKALSKCHNRNVTTCNMFRKTNLSGDSSSGT 735


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +1

Query: 127 GACCCWSCNN 156
           G  CCW C N
Sbjct: 602 GEQCCWHCFN 611


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,511
Number of Sequences: 438
Number of extensions: 3329
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)