Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335D03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U83596-1|AAC32727.1|  346|Drosophila melanogaster non-histone ch...    36   0.044
AY058757-1|AAL13986.1|  346|Drosophila melanogaster SD02315p pro...    36   0.044
AE013599-2798|AAF57616.1|  346|Drosophila melanogaster CG18608-P...    36   0.044
AY118514-1|AAM49883.1|  239|Drosophila melanogaster LD14312p pro...    34   0.10 
AE013599-2799|AAF57615.1|  239|Drosophila melanogaster CG15107-P...    34   0.10 

>U83596-1|AAC32727.1|  346|Drosophila melanogaster non-histone
           chromosomal proteinProd protein.
          Length = 346

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 388 NFIQMKWKELTGLLNSDSSGDPKSEDKWRK 299
           N++  KWKEL+  LN  SSG   + ++WRK
Sbjct: 42  NYLTKKWKELSDRLNKCSSGPTLTPEEWRK 71


>AY058757-1|AAL13986.1|  346|Drosophila melanogaster SD02315p
           protein.
          Length = 346

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 388 NFIQMKWKELTGLLNSDSSGDPKSEDKWRK 299
           N++  KWKEL+  LN  SSG   + ++WRK
Sbjct: 42  NYLTKKWKELSDRLNKCSSGPTLTPEEWRK 71


>AE013599-2798|AAF57616.1|  346|Drosophila melanogaster CG18608-PA
           protein.
          Length = 346

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 388 NFIQMKWKELTGLLNSDSSGDPKSEDKWRK 299
           N++  KWKEL+  LN  SSG   + ++WRK
Sbjct: 42  NYLTKKWKELSDRLNKCSSGPTLTPEEWRK 71


>AY118514-1|AAM49883.1|  239|Drosophila melanogaster LD14312p
           protein.
          Length = 239

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 373 KWKELTGLLNSDSSGDPKSEDKWRK 299
           KWKEL+ LLN  S+G   S ++WRK
Sbjct: 39  KWKELSDLLNKCSTGPTLSPEEWRK 63


>AE013599-2799|AAF57615.1|  239|Drosophila melanogaster CG15107-PA
           protein.
          Length = 239

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 373 KWKELTGLLNSDSSGDPKSEDKWRK 299
           KWKEL+ LLN  S+G   S ++WRK
Sbjct: 39  KWKELSDLLNKCSTGPTLSPEEWRK 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,390,116
Number of Sequences: 53049
Number of extensions: 336599
Number of successful extensions: 628
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)