Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335C07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372... 111 3e-25
06_03_1062 - 27293119-27293313,27293390-27293548,27293877-272941... 108 3e-24
05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349... 107 7e-24
01_06_1020 + 33878391-33878582,33879194-33879271,33879363-338795... 103 9e-23
05_05_0091 + 22319411-22320901 30 0.98
12_02_0726 - 22552005-22552035,22552507-22552598,22552970-225530... 30 1.3
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 30 1.3
10_01_0265 + 2808271-2809064,2809624-2809807 29 2.3
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 29 3.0
09_04_0515 + 18238434-18238545,18238659-18238709,18238844-182388... 28 4.0
11_08_0024 + 27747449-27747940,27748141-27750177 28 5.2
04_03_0359 - 14864750-14864998,14865122-14865345,14867358-148674... 28 5.2
08_02_0676 - 19943638-19943895,19944296-19944632,19944711-19945063 27 6.9
05_03_0246 + 10895627-10895829,10897012-10897078,10898258-108984... 27 6.9
08_01_0780 - 7563080-7563148,7563593-7563728,7564601-7564698,756... 27 9.1
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 27 9.1
>02_01_0516 +
3727742-3727936,3729115-3729192,3729292-3729552,
3729921-3730238,3730527-3730685,3730768-3730961,
3731644-3731647
Length = 402
Score = 111 bits (267), Expect = 3e-25
Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +1
Query: 103 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 279
+L GK+V +R D NVPL + IT++ RI A++ +VK+ L+KGAK V+L SHLGRP G V
Sbjct: 14 DLRGKKVFVRADLNVPLDDAQKITDDTRIRASVPTVKFLLEKGAK-VILASHLGRPKG-V 71
Query: 280 NLKYTLKPVAEELKKLLNKDVTFLTDCIGPEVETACADPSAGSIILLENLRFHIEEE 450
KY+LKP+ L +LL DV DCIG EVE A G ++LLEN+RF+ EEE
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVEKLAAALPEGGVLLLENVRFYKEEE 128
>06_03_1062 -
27293119-27293313,27293390-27293548,27293877-27294194,
27294535-27294795,27294901-27294978,27295707-27295901
Length = 401
Score = 108 bits (259), Expect = 3e-24
Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = +1
Query: 103 NLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQV 279
+L GK+V +R D NVPL + IT++ RI A++ ++K+ + KGAK V+L SHLGRP G V
Sbjct: 14 DLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAK-VILASHLGRPKG-V 71
Query: 280 NLKYTLKPVAEELKKLLNKDVTFLTDCIGPEVETACADPSAGSIILLENLRFHIEEE 450
KY+LKP+ L +LL DV DCIG EV+ A G ++LLEN+RF+ EEE
Sbjct: 72 TPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLENVRFYKEEE 128
>05_05_0343 -
24234026-24234235,24234254-24234502,24234642-24234959,
24235111-24235371,24235457-24235534,24235834-24236262
Length = 514
Score = 107 bits (256), Expect = 7e-24
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Frame = +1
Query: 22 RQKASKNQK*FNFLLRMALNKLS-IDALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAA 195
RQ AS + + + MA + + A +L GKRV +R D NVPL + IT++ R+ AA
Sbjct: 64 RQAASSSSRGTRAVATMAKKSVGDLTAADLEGKRVFVRADLNVPLDDNQNITDDTRVRAA 123
Query: 196 LDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLTDCIGPEV 375
+ +++Y + GAK V+L SHLGRP G V K++L P+ L +LL VT D IGP+V
Sbjct: 124 IPTIQYLIKNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVTKAEDVIGPDV 181
Query: 376 ETACADPSAGSIILLENLRFHIEEE 450
E ++ GS++LLEN+RF+ EEE
Sbjct: 182 EKLVSELPNGSVLLLENVRFYKEEE 206
>01_06_1020 +
33878391-33878582,33879194-33879271,33879363-33879524,
33879789-33880106,33880477-33880671
Length = 314
Score = 103 bits (247), Expect = 9e-23
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Frame = +1
Query: 97 ALNLTGKRVLMRVDFNVPLKEGV-ITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDG 273
A +L GKRVL+R D NVPL IT++ R++AA+ ++K+ + GAK V+L SHLGRP G
Sbjct: 11 AADLEGKRVLLRADLNVPLDASQNITDDTRVIAAIPTIKHLIGNGAK-VILCSHLGRPKG 69
Query: 274 QVNLKYTLKPVAEELKKLLNKDVTFLTDCIGPEVETACADPSAGSIILLENLRFHIEEE 450
+ K++L P+ L +LL V D IGPEVE + + GS++LLEN+RF+ EEE
Sbjct: 70 -ITPKFSLAPLVPRLSELLGIQVQKADDVIGPEVEKSVSVLPNGSVLLLENVRFYKEEE 127
>05_05_0091 + 22319411-22320901
Length = 496
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = -1
Query: 473 PEASTPLPSSSMWKRRFSSRIIEPAEGSAHAVSTSGPMQSVKNVTSLFSNFFSSSATGLR 294
P PLP + R S ++ P +A S SGP+Q + L S+S +R
Sbjct: 245 PGLPPPLPPAEAVHSRLSKLLLHPMSAAAQPRSLSGPIQ--RRDVPLRIEMSSNSCPIIR 302
Query: 293 VYLRFTWPSGLPKCD 249
+ + W + P D
Sbjct: 303 SHCQQPWQTSPPGVD 317
>12_02_0726 -
22552005-22552035,22552507-22552598,22552970-22553094,
22553221-22553311,22553475-22553755,22554211-22554394,
22554499-22554583,22554692-22554782,22554909-22555293,
22555457-22555669,22555873-22556418,22556572-22556788,
22556907-22557058,22557519-22557663,22557846-22557907,
22559130-22559291,22559393-22559482,22560055-22560215,
22560907-22560997,22561125-22561308,22561556-22561737,
22561857-22562086,22562622-22562685
Length = 1287
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 154 KEGVITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLN 333
+ GV+ + + +AAL D AKS + L +G L + P E +K+LN
Sbjct: 601 RHGVVLDGE--IAALFFKHENYDLAAKSYEKVCALYSAEGWEELLADVLPDLAECQKILN 658
Query: 334 KDVTFLTDCI 363
+ +LT C+
Sbjct: 659 DEAGYLTSCV 668
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 208 KYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLTDCI 363
+Y + V M+H + ++ L +AEE KKLL KD T + +
Sbjct: 687 RYITSSVKSAFVKMAHSVEAKADTSHEHVLASLAEETKKLLKKDTTVFSSVL 738
>10_01_0265 + 2808271-2809064,2809624-2809807
Length = 325
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 497 SGSAFTLAPEASTPLPSSSMWKRRFSSRIIEPAEGS 390
S + F LAP AS +P+ S W R R + A+G+
Sbjct: 61 STTGFALAPGASQAVPAPSGWSGRMWGRTLCAADGA 96
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 313 ELKKLLNKDVTFLTDCIGPEVETACADPSAGSIILLENLRF 435
EL+K+LN+D++ L +G +T G I+L+ +LR+
Sbjct: 92 ELEKMLNQDLSRLYPELGNFFQTTICQSMLGRILLVWSLRY 132
>09_04_0515 +
18238434-18238545,18238659-18238709,18238844-18238897,
18239727-18239777,18239845-18239895,18240056-18240210,
18240550-18240663,18240873-18240938,18241478-18241561,
18241640-18241726,18241975-18242066,18242163-18242223,
18242475-18242531,18243129-18243220,18243394-18243584,
18244203-18244321,18244518-18244589,18244699-18244784,
18244866-18244962,18245488-18245622
Length = 608
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 172 NNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFL 351
++ R VAA+ ++ ++KG V L++ G G+ + Y + + ++ L N+D+ +
Sbjct: 102 SHHRAVAAVRLLR--IEKGKAFVDLLNEKGNSSGENEMSYVERTLGFSIRCLDNRDIRLV 159
Query: 352 T 354
T
Sbjct: 160 T 160
>11_08_0024 + 27747449-27747940,27748141-27750177
Length = 842
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 145 VPLKEGVITNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKK 324
+P GV+ N QR+ + ++ G ++ + +L D Q L T+ P L +
Sbjct: 465 IPSNIGVLKNIQRLFLGTNQFSSSISMGISNMTKLEYLDLSDNQ--LASTVPPSLFHLDR 522
Query: 325 LLNKDVT--FLTDCIGPEV 375
L+ D++ FL+ + ++
Sbjct: 523 LVKLDLSHNFLSGALPADI 541
>04_03_0359 -
14864750-14864998,14865122-14865345,14867358-14867475,
14867586-14867960,14869257-14869673
Length = 460
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 149 GTLKSTRIRTLLPVKLSASI 90
G L S R+R LLP+KLSA++
Sbjct: 160 GHLVSKRVRDLLPIKLSANL 179
>08_02_0676 - 19943638-19943895,19944296-19944632,19944711-19945063
Length = 315
Score = 27.5 bits (58), Expect = 6.9
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Frame = -1
Query: 518 ALKALTFSGSAFTLAPEASTPLPSSSMWKRRFSSRIIEPAEGSAHAVSTSGPMQS-VKNV 342
A+ A S +A A P +++ R PAE VST GP + + N
Sbjct: 24 AVTASMVSHGCVVVAHGALGPELREALFSRAARELFALPAEAKRRNVSTVGPYRGYITNT 83
Query: 341 TSL--FSNFFSSSATGLRV--YLRFTWPSGLPKCDISTTDLAPLSKAYLTESKAATMR 180
+ S ++A RV + WP G P+ S++D +TE + A R
Sbjct: 84 PGMNWESLHVGAAADAGRVPEFAGLLWPDGNPEFWCSSSDTIVSFAKKMTELERAVER 141
>05_03_0246 +
10895627-10895829,10897012-10897078,10898258-10898433,
10898450-10898583,10900165-10901594
Length = 669
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 306 DWFEGVLEIYLAIRSTQMRHKYN*FSAFIQSIFNGI*GSYNALVVCNHSF 157
D EG L + +A+ +RH+ F+AF+ + + G Y L C+H F
Sbjct: 434 DAVEG-LAVGMAVHGHVVRHEVQ-FTAFLGTALIDMYGKYGKLSCCSHIF 481
>08_01_0780 -
7563080-7563148,7563593-7563728,7564601-7564698,
7565189-7565303,7565469-7565621,7565858-7565943,
7566537-7567114,7567190-7567307,7567921-7567953
Length = 461
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +1
Query: 169 TNNQRIVAALDSVKYALDKGAKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLLNKDVTF 348
TN+ + +A L + + LD VLM L R +V L L V K L+ KD+
Sbjct: 241 TNSAKFLALLIVIPWVLDFLVHDYVLMPFLERYVQKVPLAAELLDVRRSQKLLMVKDINT 300
Query: 349 LTDCIGPEVETACADPSAGSIILLE 423
EVE + P + + +E
Sbjct: 301 EKARYRFEVEIGKSPPLSDDELWIE 325
>03_01_0611 +
4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 392 SAHAVSTSGPMQSVKNVTSLFSNFFSSSAT 303
S+H V GP TSL SN++++S+T
Sbjct: 335 SSHIVCQLGPFDESLEFTSLSSNWYTASST 364
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,153,948
Number of Sequences: 37544
Number of extensions: 224482
Number of successful extensions: 666
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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