Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335C07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88169-9|AAB42230.1|  417|Caenorhabditis elegans Phosphoglycerat...   233   4e-62
Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z66513-15|CAA91337.3|  487|Caenorhabditis elegans Hypothetical p...    28   3.5  
U64603-4|AAO61442.1|  410|Caenorhabditis elegans Serotonin/octop...    28   3.5  
U64603-3|AAM15552.1|  422|Caenorhabditis elegans Serotonin/octop...    28   3.5  
U64603-2|AAB04582.3|  435|Caenorhabditis elegans Serotonin/octop...    28   3.5  
AL110499-6|CAB57915.2|  487|Caenorhabditis elegans Hypothetical ...    28   3.5  
AL132865-2|CAB60593.1|  176|Caenorhabditis elegans Hypothetical ...    27   6.2  
L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine aminope...    27   8.1  

>U88169-9|AAB42230.1|  417|Caenorhabditis elegans Phosphoglycerate
           kinase protein 1 protein.
          Length = 417

 Score =  233 bits (571), Expect = 4e-62
 Identities = 112/148 (75%), Positives = 127/148 (85%)
 Frame = +1

Query: 73  ALNKLSIDALNLTGKRVLMRVDFNVPLKEGVITNNQRIVAALDSVKYALDKGAKSVVLMS 252
           +LNKL+ID LNL GKRVL+RVDFNVPLK+G ITNNQRI AA+ ++++AL  GAKSVVLMS
Sbjct: 3   SLNKLAIDQLNLAGKRVLIRVDFNVPLKDGKITNNQRIAAAVPTIQHALSNGAKSVVLMS 62

Query: 253 HLGRPDGQVNLKYTLKPVAEELKKLLNKDVTFLTDCIGPEVETACADPSAGSIILLENLR 432
           HLGRPDG+   KYTLKPVAEELK LL KDV FL DC+G EVE ACADP+ GS+ILLENLR
Sbjct: 63  HLGRPDGRRQDKYTLKPVAEELKALLKKDVLFLDDCVGSEVEAACADPAPGSVILLENLR 122

Query: 433 FHIEEEGKGVDASGAKVKADPEKVKAFR 516
           +H+EEEGKGVDASGAKVKAD   VK FR
Sbjct: 123 YHLEEEGKGVDASGAKVKADSAAVKKFR 150


>Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical
           protein K08E3.5e protein.
          Length = 496

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
 Frame = -1

Query: 461 TPLPSSSMWKRRFSSRIIEPAEGS-AHAVSTSGPMQSVKNVTSLFSNFFSSSATGLRVYL 285
           TP PSS  WK       +   EG  AH +ST  P     N T L S F +  A  LR   
Sbjct: 2   TPFPSSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTEL-SGFRNLFARFLRAKP 60

Query: 284 RFTWPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVI 165
              W    P  + +      L      E  A+ +R L V+
Sbjct: 61  TVDWSKIEPLPEGAIRPYKSLGHVVDKELIASQLRKLVVV 100


>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
           protein Y49E10.19 protein.
          Length = 1159

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467 ASTPLPSSSMWKRRFSSRIIEPAEGSAHAVSTSGPM-QSVKNVTSLFSNFFSSSATGLRV 291
           A+ P+P  + W+ + ++ +++ A           P+   V  + +L S +  SSATG  +
Sbjct: 470 ATAPIPVQTQWRGQSNTPVVQGARADEKTAGNEPPVGAGVGKLKNLKSRWEFSSATGTPI 529

Query: 290 Y 288
           +
Sbjct: 530 H 530


>Z66513-15|CAA91337.3|  487|Caenorhabditis elegans Hypothetical
           protein F54D5.12 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 229 AKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLL 330
           AK +V   HLG  DG  +L  T +   EEL+KLL
Sbjct: 396 AKRIVTYGHLG--DGNTHLNITSEKHNEELEKLL 427


>U64603-4|AAO61442.1|  410|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform c
           protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = -1

Query: 275 WPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVITPSLSGTLKSTRIRTLLPVK--- 105
           WP G   C + TT    L  A +    A ++    VI+  L  + K T  R ++ +    
Sbjct: 107 WPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVW 166

Query: 104 LSASILNLFKAILSRKLN 51
           + A+I+++   I++  LN
Sbjct: 167 IIAAIVSISSHIIANLLN 184


>U64603-3|AAM15552.1|  422|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform b
           protein.
          Length = 422

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = -1

Query: 275 WPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVITPSLSGTLKSTRIRTLLPVK--- 105
           WP G   C + TT    L  A +    A ++    VI+  L  + K T  R ++ +    
Sbjct: 107 WPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVW 166

Query: 104 LSASILNLFKAILSRKLN 51
           + A+I+++   I++  LN
Sbjct: 167 IIAAIVSISSHIIANLLN 184


>U64603-2|AAB04582.3|  435|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform a
           protein.
          Length = 435

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = -1

Query: 275 WPSGLPKCDISTTDLAPLSKAYLTESKAATMRWLFVITPSLSGTLKSTRIRTLLPVK--- 105
           WP G   C + TT    L  A +    A ++    VI+  L  + K T  R ++ +    
Sbjct: 107 WPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIACVW 166

Query: 104 LSASILNLFKAILSRKLN 51
           + A+I+++   I++  LN
Sbjct: 167 IIAAIVSISSHIIANLLN 184


>AL110499-6|CAB57915.2|  487|Caenorhabditis elegans Hypothetical
           protein F54D5.12 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 229 AKSVVLMSHLGRPDGQVNLKYTLKPVAEELKKLL 330
           AK +V   HLG  DG  +L  T +   EEL+KLL
Sbjct: 396 AKRIVTYGHLG--DGNTHLNITSEKHNEELEKLL 427


>AL132865-2|CAB60593.1|  176|Caenorhabditis elegans Hypothetical
           protein Y62E10A.3 protein.
          Length = 176

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 373 VETACADPSAGSIILLENLRFHIEEEGKGVDASGAKVK 486
           ++  C D S GSI+ +++   H+ + G+   AS   +K
Sbjct: 90  IKNVCMDVSNGSILAMKSFTLHLSKTGEEQSASPHFIK 127


>L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine
           aminopeptidase protein 1 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 322 KLLNKDVTFLTDCIGPEVETACADPSAGSIILLENLRFHIEEEGKGVDASGAKV 483
           KL N+D  FLTD      ETA    +  +I+  + L   ++E  K  +A+G+K+
Sbjct: 154 KLTNEDAVFLTDLSESVRETARLIDTPANILTTDAL---VDEAVKVGNATGSKI 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,784,987
Number of Sequences: 27780
Number of extensions: 206741
Number of successful extensions: 580
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)