Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335C05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1073 + 8456426-8456677,8457039-8457152,8457546-8457710 33 0.11
09_04_0263 + 16225591-16225830 32 0.32
08_01_0865 - 8445317-8445571 31 0.56
01_07_0302 - 42611150-42611812,42611881-42611961,42612064-426121... 31 0.74
02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208... 30 0.98
07_01_0726 - 5543633-5543887 29 1.7
10_01_0059 + 806112-806405 29 2.3
01_01_1074 + 8460072-8460326 29 2.3
02_05_1083 + 33982277-33982531 29 3.0
01_03_0271 + 14454681-14456949,14457222-14457476,14458800-144588... 29 3.0
07_02_0027 - 11963040-11963294 28 4.0
07_01_0829 - 6703293-6703547 28 4.0
06_03_0476 - 21228474-21228728 28 4.0
01_06_0581 - 30386018-30386440 28 4.0
12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356 28 5.2
03_02_0324 - 7463482-7463601,7463660-7463736,7463827-7463883,746... 28 5.2
01_03_0012 + 11638363-11638476,11638854-11640678,11641855-116420... 28 5.2
11_01_0755 - 6343084-6345172,6345526-6346367 27 6.9
04_04_0870 + 28895594-28895870,28896017-28896354 27 6.9
04_01_0377 - 4970034-4970687 27 9.1
>01_01_1073 + 8456426-8456677,8457039-8457152,8457546-8457710
Length = 176
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSP 133
HDN + T +H + ++ Q+ +I+L D YSP +SP+ + + L G RF
Sbjct: 7 HDNQHTPTRSHNIQAYIRQDTPPDIDLKDRHGYSPTVSPDTVRRYESAISDLAGHRFEEE 66
Query: 132 EEAV 121
+ V
Sbjct: 67 DYPV 70
>09_04_0263 + 16225591-16225830
Length = 79
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSP 133
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G RF
Sbjct: 5 HDNQHTPTRSHNIQAYIRQDTPPDIDFRDRHGYSPTVSPDTVKRYKSAISDLAGHRFEEK 64
Query: 132 EEAV 121
+ V
Sbjct: 65 DYPV 68
>08_01_0865 - 8445317-8445571
Length = 84
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRF 142
HDN + T +H T+ ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTSTRSHNTQAYIRQDTPPDIDFRDRHGYSPTVSPDTVRRYESAISDLAGHGF 61
>01_07_0302 -
42611150-42611812,42611881-42611961,42612064-42612150,
42612283-42612378,42612479-42612543,42612919-42612975,
42613066-42613147,42613235-42613327,42613714-42613785,
42613881-42613985
Length = 466
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 249 QENIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSPEE 127
+EN+ + D +PD P D YT K K K Q+ SPEE
Sbjct: 273 EENLPINDAD--TPDDGPTDIYTKKKGKGKHSKQQIKSPEE 311
>02_01_0312 -
2082614-2082677,2082815-2082945,2083041-2083129,
2083223-2083292,2083429-2083509,2083768-2083821,
2084864-2085067,2086272-2086366,2086976-2086997,
2087492-2087585,2087677-2087764,2087874-2087979,
2088103-2088189,2088261-2088309,2088418-2088521,
2088605-2088697,2088900-2088974,2089316-2089384,
2090182-2090250,2090339-2090374,2090471-2090565,
2090836-2090911,2091067-2091153,2091287-2091355,
2091654-2091731,2091836-2091925,2092436-2092642,
2092736-2092879
Length = 841
Score = 30.3 bits (65), Expect = 0.98
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -3
Query: 375 YASICLPQVVSELRKENCNRRIILHHDNASSHTAHRTKEFLEQENIELLDHPPYSPDLSP 196
Y S P S+L + + I H + A HR +++ DHP SP+ S
Sbjct: 432 YTSFIEPITASKLHNDIKAHKDIAHFETAYVVKLHRIARLAPTQSVFTFDHPNPSPNAS- 490
Query: 195 NDFYT 181
N YT
Sbjct: 491 NQRYT 495
>07_01_0726 - 5543633-5543887
Length = 84
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 300 HDNASSHTA-HRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSP 133
HDN + T+ H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTPTSSHNIQAYIRQDTPPDIDFRDRHGYSPTVSPDTVRRYESAISDLAGHGFEEE 64
Query: 132 EEAV 121
AV
Sbjct: 65 GYAV 68
>10_01_0059 + 806112-806405
Length = 97
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSP 133
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTPTRSHNIQAYIRQDTPPDIDFRDRHGYSPTVSPDTVRRYESAISDLAGHGFEKE 64
Query: 132 EEAV 121
+ V
Sbjct: 65 DYPV 68
>01_01_1074 + 8460072-8460326
Length = 84
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSP 133
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTPTRSHNIQAYIRQDTPPDIDFKDRHGYSPTVSPDTVRRYESAISDLAGHGFEEE 64
Query: 132 EEAV 121
+ V
Sbjct: 65 DYPV 68
>02_05_1083 + 33982277-33982531
Length = 84
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRF 142
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTSTRSHNIQAYIRQDTPPDIDFRDRHGYSPTVSPDTVRRYESAISDLAGHGF 61
>01_03_0271 +
14454681-14456949,14457222-14457476,14458800-14458864,
14459053-14459171,14459270-14459324
Length = 920
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 320 LQFSLRSSETTCGKQMLAYHSAPTVLCPSRGIVVTWPVL 436
L+ S+ + T CG AY SA TVL S+G V +W L
Sbjct: 287 LETSIVNFYTRCG----AYQSAATVLQNSKGTVASWNAL 321
>07_02_0027 - 11963040-11963294
Length = 84
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRFSSP 133
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTPTRSHNIQAYVSQDTPPDIDFRDRHGYSPTVSPDTVRRYESTISDLAGHGFEEE 64
Query: 132 E 130
+
Sbjct: 65 D 65
>07_01_0829 - 6703293-6703547
Length = 84
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRF 142
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTPTRSHNIQAYIRQDTPPDIDFRDRHGYSPTVSPDTVRRYESAISDLAGHGF 61
>06_03_0476 - 21228474-21228728
Length = 84
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 300 HDNASSHT-AHRTKEFLEQE---NIELLDHPPYSPDLSPNDFYTFPKIKNKLCGQRF 142
HDN + T +H + ++ Q+ +I+ D YSP +SP+ + + L G F
Sbjct: 5 HDNQHTPTRSHNIQAYIRQDTPSDIDFRDRHGYSPTVSPDTVRRYESAISDLAGHGF 61
>01_06_0581 - 30386018-30386440
Length = 140
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 350 TCGKQMLAYHSAPTVLCPS 406
+C L+ HSAPT+LCPS
Sbjct: 2 SCPSCCLSNHSAPTLLCPS 20
>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
Length = 480
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 313 HHPPSRQCEFSHRAQNKRVFRARKHRIIRPSAVQPRP 203
H P + C + + F R+ R RP+A QPRP
Sbjct: 33 HRPSAGSCHHACKYGGAHAFEERESR--RPAAAQPRP 67
>03_02_0324 -
7463482-7463601,7463660-7463736,7463827-7463883,
7464154-7464246,7464528-7464654,7464836-7466794
Length = 810
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 408 LEGQRTVGAEWYASICLPQVVSELRKENCNRRIILHHDNAS 286
+EG+ V + +YAS L Q+ + +K+ C +IL H +
Sbjct: 725 MEGKNYVNSSYYASFILSQIQANFQKDIC---LILGHQQGA 762
>01_03_0012 +
11638363-11638476,11638854-11640678,11641855-11642096,
11642198-11642327,11642464-11642774
Length = 873
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = -2
Query: 484 CSFTECC---KKNCGHVCLQNRPCYD 416
C + CC + N GHVC NR YD
Sbjct: 457 CVYESCCDLSQGNDGHVCFCNRNLYD 482
>11_01_0755 - 6343084-6345172,6345526-6346367
Length = 976
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = -3
Query: 483 VRSRSVAKKIVATFVSKTGHVTTIPLEGQRTVGAEWYASIC-LPQVV---SELRKENCNR 316
+RSR +++ G+++++ L+G+ + ++ S+C L ++ + L KE+ +
Sbjct: 749 LRSRKFPNRLLCCLEKSYGYLSSLKLQGELSRFPQFITSLCGLTELCLSSTNLNKEDLSN 808
Query: 315 RIILHH 298
LHH
Sbjct: 809 VCTLHH 814
>04_04_0870 + 28895594-28895870,28896017-28896354
Length = 204
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 12 LKMYLLLFEVFSAKPDTPLHTMEPIIEATIPLGSRGPQ 125
L+ +L++ F+A P+H + PI ++ S GPQ
Sbjct: 51 LEQQVLIYRYFAAGAPVPVHLVLPIWKSIAAASSFGPQ 88
>04_01_0377 - 4970034-4970687
Length = 217
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 469 CCKKNCGHVCLQNRPCYDYSS*GTKNGWCGMVC 371
C K+N G +C N C + G +CG C
Sbjct: 21 CGKQNDGMICPHNLCCSQFGYCGLGRDYCGTGC 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,901,828
Number of Sequences: 37544
Number of extensions: 357045
Number of successful extensions: 994
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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