Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335C05f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 73 2e-15
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 41 9e-06
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 31 0.009
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 26 0.20
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 1.9
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 23 1.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 1.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.4
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 4.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 5.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 7.7
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 7.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 7.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 7.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 7.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 7.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 7.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 7.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 7.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.7
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 72.9 bits (171), Expect = 2e-15
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = -3
Query: 360 LPQVVSELRKENCNRR-IILHHDNASSHTAHRTKEFLEQENIELLDHPPYSPDLSPNDFY 184
L V E R E NR+ ++ HHDNA HT+ T++ L + ++L HPPYSPDL+P+D++
Sbjct: 223 LNNAVEEKRPELTNRKGVVFHHDNARPHTSLVTRQKLLELGWDVLPHPPYSPDLAPSDYF 282
Query: 183 TFPKIKNKLCGQRFSSPEE 127
F ++N L G+ F++ ++
Sbjct: 283 LFRSLQNSLNGKNFNNDDD 301
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 40.7 bits (91), Expect = 9e-06
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -3
Query: 360 LPQVVSELRKENCNRR-IILHHDNASSHTAHRTKEFLEQENIELLDHPP 217
L V E R E NR+ ++ HHDNA HT+ T++ L + ++L HPP
Sbjct: 101 LNNAVEEKRPELTNRKSVVFHHDNARPHTSLVTRQKLLELGWDVLPHPP 149
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 30.7 bits (66), Expect = 0.009
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 360 LPQVVSELRKENCNRR-IILHHDNASSHTAHRTKEFLEQENIELLDH 223
L + E R E NR+ ++ HHD+A HT T++ L + ++L H
Sbjct: 102 LNNAIEEKRFELTNRKGVVFHHDDARPHTYLVTRQKLLELGWDVLPH 148
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 26.2 bits (55), Expect = 0.20
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 262 RVFRARKHRIIRPSAVQPRPE 200
R+F A KH RPS + PR +
Sbjct: 748 RIFNASKHSAKRPSFISPRSQ 768
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -3
Query: 171 IKN--KLCGQRFSSPEEAVDPGFRVEW 97
IKN K+C ++ +P+E +D FR E+
Sbjct: 36 IKNLRKVCSKKNDTPKELLDGQFRGEF 62
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -3
Query: 171 IKN--KLCGQRFSSPEEAVDPGFRVEW 97
IKN K+C ++ +P+E +D FR E+
Sbjct: 10 IKNLRKVCSKKNDTPKELLDGQFRGEF 36
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 1.9
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +3
Query: 51 KPDTPLHTMEPIIEATIPLGSRGPQLLQVMKISGHTIYSLF*GKYRNH*GSGRGCTADGL 230
+ T L + +IEA + + Q+ V + HT F Y N GC AD L
Sbjct: 330 RTSTSLWKDKAMIEANVAV-LHSFQMKNVTIVDHHTASESFMKHYENEMRLRNGCPADWL 388
Query: 231 IIL 239
I+
Sbjct: 389 WIV 391
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A
protein.
Length = 782
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1
Query: 95 CFNDWFHRMEGCV 57
C DWF GCV
Sbjct: 21 CSRDWFRISAGCV 33
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 110 SEWNGCFNDWFHRMEGCVG 54
+EW+ N W ++E VG
Sbjct: 389 TEWSSFINPWTKKLEFVVG 407
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 110 SEWNGCFNDWFHRMEGCVG 54
+EW+ N W ++E VG
Sbjct: 95 TEWSSFINPWTKKLEFVVG 113
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 348 VSELRKENCNRRIILHHDNASSHTA 274
+S+L NC +HH +SS A
Sbjct: 397 LSDLHHPNCKINRKVHHTTSSSSAA 421
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 323 RSREHRIIPSHYIEQIPAPVYYGNFP 348
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 177 PKIKNKLCGQRFSSPEEAVDPGF 109
PK+KNK G + +DP +
Sbjct: 327 PKVKNKKAGSKHLLQNTWLDPEY 349
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 75 RSREHRIIPSHYIEQIPVPVYYGNFP 100
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 308 RSREHRIIPSHYIEQIPVPVYYGNFP 333
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 253 RARKHRIIRPSAVQPRPEP**FLYFP 176
R+R+HRII ++ P P + FP
Sbjct: 324 RSREHRIIPSHYIEQIPVPVYYGNFP 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,102
Number of Sequences: 438
Number of extensions: 3262
Number of successful extensions: 28
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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