Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335C04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 146 2e-36
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 144 5e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 99 2e-22
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 97 2e-21
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 75 5e-15
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 52 4e-08
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 46 3e-06
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 31 0.079
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 29 0.56
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 0.73
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 27 1.7
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 27 2.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.0
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 26 3.9
SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr... 25 5.2
SPAC4G9.10 |arg3||ornithine carbamoyltransferase Arg3|Schizosacc... 25 5.2
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 5.2
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 25 6.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 6.8
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 146 bits (354), Expect = 2e-36
Identities = 76/131 (58%), Positives = 86/131 (65%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 313 EPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAA 372
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L GD SE+ QD GIETAGGVMT LIKRN YSDN
Sbjct: 373 VQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDN 432
Query: 363 QPGVLIQVF*G 395
QPGVLIQVF G
Sbjct: 433 QPGVLIQVFEG 443
Score = 76.6 bits (180), Expect = 2e-15
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
FEGERA TKD NLLGKFEL+GIPPAPRGVPQ+ FD+D +GIL
Sbjct: 441 FEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGIL 484
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 144 bits (350), Expect = 5e-36
Identities = 75/131 (57%), Positives = 86/131 (65%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 313 EPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAA 372
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
IL GD SE+ QD GIETAGGVMT LIKRN Y+DN
Sbjct: 373 VQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADN 432
Query: 363 QPGVLIQVF*G 395
QPGVLIQVF G
Sbjct: 433 QPGVLIQVFEG 443
Score = 76.6 bits (180), Expect = 2e-15
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
FEGERA TKD NLLGKFEL+GIPPAPRGVPQ+ FD+D +GIL
Sbjct: 441 FEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGIL 484
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 99 bits (238), Expect = 2e-22
Identities = 58/131 (44%), Positives = 75/131 (57%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 345 KPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAA 403
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L G++ + + GIET GGVMT LI RN DN
Sbjct: 404 VQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDN 461
Query: 363 QPGVLIQVF*G 395
Q VLIQV+ G
Sbjct: 462 QNTVLIQVYEG 472
Score = 74.5 bits (175), Expect = 9e-15
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
+EGER +TKDNNLLGKF+L GIPPAPRGVPQ+ F++D +G+L
Sbjct: 470 YEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVL 513
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 96.7 bits (230), Expect = 2e-21
Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 317 DPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAA 376
Query: 183 XXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSD 359
+L + S++ QD G+ G V + RN +D
Sbjct: 377 VQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVAD 436
Query: 360 NQPGVLIQVF*G 395
NQ V V+ G
Sbjct: 437 NQTTVTFPVYQG 448
Score = 54.0 bits (124), Expect = 1e-08
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
++GER +N LG+F+LTGIPP PRG +L + F++D +GIL
Sbjct: 446 YQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGIL 489
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 75.4 bits (177), Expect = 5e-15
Identities = 44/131 (33%), Positives = 67/131 (51%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 361 DPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAA 419
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L G V+D GIET GGV T LI RN +D
Sbjct: 420 IQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADG 475
Query: 363 QPGVLIQVF*G 395
Q V I+VF G
Sbjct: 476 QTAVEIRVFQG 486
Score = 62.1 bits (144), Expect = 5e-11
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +1
Query: 382 KYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
+ F+GER + +DN L+G F+LTGI PAP+G PQ+ FD+D GI+
Sbjct: 482 RVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGII 527
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 52.4 bits (120), Expect = 4e-08
Identities = 20/53 (37%), Positives = 38/53 (71%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 161
EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 349 EPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 46.0 bits (104), Expect = 3e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +3
Query: 6 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 161
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 31.5 bits (68), Expect = 0.079
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 9 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 146
V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 28.7 bits (61), Expect = 0.56
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +1
Query: 310 TLPSPLNRLRHSPPTLITNPEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRS 489
T P RLRH+P I E KY G A D NL K PP + P +S
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLRG-LAEESDPNL--KLPSFLAPPNDKDSPVNQS 99
Query: 490 PF 495
P+
Sbjct: 100 PW 101
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 0.73
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 242 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRFV--ELLSIKEILQELLHLGDTSGA 75
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 74 THQYNIVDLSLIHLGIT 24
+ I D SL+ L T
Sbjct: 992 NLETTIEDTSLVKLETT 1008
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 456 WDPGQLEFTEQVVIFGHSTLTLKIL--G*VLRVGYQS 352
WD G+ ++ I GHS +L +L G VL Y S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNS 97
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +1
Query: 307 VTLPSPLNRLRHSPPTLITNPEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVP--- 477
V + P N R++ + N + G R ++ N+ F +GIP RG+P
Sbjct: 587 VNMRGPRNTSRNNSSSEF-NAQIPMNLRNGPRNASRSNSSTDLFGQSGIPGNSRGMPTSP 645
Query: 478 --QLRSPFDIDXHGI 516
+ S D+ HGI
Sbjct: 646 NSRNNSALDLSMHGI 660
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 57 RGFEPYPSWHHGETSPLAP 1
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 256 FPSVLRLLEVS*PHSSSVTLPSPLNRLRHSPPTLITNPEYSSKYFEGERAMTKD 417
F +L LE +S+V S +R+ PP +++ E S+YF + + D
Sbjct: 187 FLEILAKLEQQEKEASNV---SEASRIATIPPMILSEEEVKSQYFNDQSRLVTD 237
>SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr
2|||Manual
Length = 667
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 292 PHSSSVTLPSPLNRLRHSPPTLITNPEYSSKYFEGERAM 408
P S+S+ PLN SP L+ P S E ERAM
Sbjct: 511 PSSNSLKFSIPLNFPVRSPEQLVRLPIRSCSIEELERAM 549
>SPAC4G9.10 |arg3||ornithine carbamoyltransferase
Arg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 5.2
Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Frame = -1
Query: 440 SNLPSKLLSLVIARSPSKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTE 261
S L S+ ++++ ++ ++ V +GG + L D + ++E +DTS +++
Sbjct: 48 SGLSSQNVAMIFSKRSTRTRVSVESAVSCLGGNAMFLGKDDIQLGVNESLYDTSKVISSM 107
Query: 260 GKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLV----RVNRFVELLSIKEILQ----- 108
G + + + L + SC + GL + +LL+IKE +
Sbjct: 108 VSGIVARVNKYSDVATL-----AKHASCPVINGLCDTFHPLQALADLLTIKETFKSFDGL 162
Query: 107 ELLHLGDTSGATHQYNIVDLSL-IHLGITE 21
++ +GD + H I + + IH + +
Sbjct: 163 KVAWVGDANNVLHDLMIANAKVGIHTSVAK 192
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -1
Query: 380 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 201
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 200 QDSSLDSCTISYGLVR 153
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 464 GAGGIPVSSNLPSKLLSLVIARSPSKYLDE-YSGLVIRVGGECLSLFSGDGSVTLDECGH 288
G +P ++L ++ AR + D+ +S IR ++ SGD LD C
Sbjct: 506 GLSRVPFEPYTHTQLEIIIAARLEAVRDDDVFSSDAIRFAARKVAAVSGDARRALDICRR 565
Query: 287 DTSSSLNTEGK 255
+ + N GK
Sbjct: 566 ASELAENKNGK 576
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 458 GGIPVSSNLPSKLLSLVIARSPSKYLDEYSGLVIRVGGECLSLF 327
G + SS+ P +LSL + S +LD +S L + G +S F
Sbjct: 18 GPMRPSSDAPYHVLSLPFSHPYSAFLDAWSWLFCGITGGEVSFF 61
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 61 LYWWVAPLVSPRCRSSCKISLMERSSTNLL 150
LYW V C+S IS + SST+LL
Sbjct: 540 LYWDVQAAKDVDCKSVVDISQLRVSSTSLL 569
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,161,575
Number of Sequences: 5004
Number of extensions: 41789
Number of successful extensions: 173
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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