Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335C04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 165 2e-41
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 165 2e-41
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 143 6e-35
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 143 6e-35
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 138 2e-33
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 109 2e-24
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 109 2e-24
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 102 2e-22
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 84 5e-17
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 81 5e-16
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 67 8e-12
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 65 3e-11
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 40 0.001
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical ... 31 0.66
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 29 2.0
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 29 2.0
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 29 2.0
Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 165 bits (400), Expect = 2e-41
Identities = 92/164 (56%), Positives = 98/164 (59%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 316 DPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAA 375
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
IL GDKSE VQD GIETAGGVMT LIKRN YSDN
Sbjct: 376 VQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDN 435
Query: 363 QPGVLIQVF*G*ACYDQR*QLAR*IRADRDPTGAAWRASIEVTF 494
QPGVLIQV+ G + L P IEVTF
Sbjct: 436 QPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTF 479
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQ+ FDID +GIL
Sbjct: 444 YEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGIL 487
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 165 bits (400), Expect = 2e-41
Identities = 92/164 (56%), Positives = 98/164 (59%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 316 DPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAA 375
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
IL GDKSE VQD GIETAGGVMT LIKRN YSDN
Sbjct: 376 VQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDN 435
Query: 363 QPGVLIQVF*G*ACYDQR*QLAR*IRADRDPTGAAWRASIEVTF 494
QPGVLIQV+ G + L P IEVTF
Sbjct: 436 QPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTF 479
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQ+ FDID +GIL
Sbjct: 444 YEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGIL 487
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 143 bits (347), Expect = 6e-35
Identities = 72/131 (54%), Positives = 86/131 (65%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 316 EPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAA 375
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L G K E ++D GIETAGGVMT LI RN Y+DN
Sbjct: 376 VQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADN 435
Query: 363 QPGVLIQVF*G 395
QPGV IQV+ G
Sbjct: 436 QPGVSIQVYEG 446
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 367 PEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
P S + +EGERAMT+DN+ LG FEL+GIPPAPRGVPQ+ FDID +GIL
Sbjct: 437 PGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGIL 487
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 143 bits (347), Expect = 6e-35
Identities = 72/131 (54%), Positives = 86/131 (65%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 316 EPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAA 375
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L G K E ++D GIETAGGVMT LI RN Y+DN
Sbjct: 376 VQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADN 435
Query: 363 QPGVLIQVF*G 395
QPGV IQV+ G
Sbjct: 436 QPGVSIQVYEG 446
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 367 PEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
P S + +EGERAMT+DN+ LG FEL+GIPPAPRGVPQ+ FDID +GIL
Sbjct: 437 PGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGIL 487
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 138 bits (334), Expect = 2e-33
Identities = 70/131 (53%), Positives = 84/131 (64%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EPVEK+LRDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE
Sbjct: 316 EPVEKALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAA 375
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L G K + ++D GIETAGGVMT LI RN Y+DN
Sbjct: 376 VQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGGVMTNLIDRNTRIPAKASKTFTTYADN 435
Query: 363 QPGVLIQVF*G 395
QPGV IQV+ G
Sbjct: 436 QPGVSIQVYEG 446
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +1
Query: 367 PEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
P S + +EGERAMT+DN+ LG FELTGIPPAPRGVPQ+ FDID +GIL
Sbjct: 437 PGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGIL 487
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 109 bits (261), Expect = 2e-24
Identities = 58/131 (44%), Positives = 76/131 (58%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 345 KPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAA 404
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
++ G+ E+ + GIET GGVMT LI RN +DN
Sbjct: 405 VQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADN 462
Query: 363 QPGVLIQVF*G 395
QP V IQVF G
Sbjct: 463 QPTVTIQVFEG 473
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 367 PEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
P + + FEGER MTKDN+ LGKF+LTG+PPAPRGVPQ+ F+ID +GIL
Sbjct: 464 PTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGIL 514
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 109 bits (261), Expect = 2e-24
Identities = 58/131 (44%), Positives = 76/131 (58%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 345 KPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAA 404
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
++ G+ E+ + GIET GGVMT LI RN +DN
Sbjct: 405 VQGGVISGE--EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADN 462
Query: 363 QPGVLIQVF*G 395
QP V IQVF G
Sbjct: 463 QPTVTIQVFEG 473
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 367 PEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
P + + FEGER MTKDN+ LGKF+LTG+PPAPRGVPQ+ F+ID +GIL
Sbjct: 464 PTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGIL 514
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 102 bits (244), Expect = 2e-22
Identities = 56/131 (42%), Positives = 72/131 (54%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
+PV+K L DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE
Sbjct: 342 KPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAA 401
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
++ G E D GIET GGVMT LI RN +D+
Sbjct: 402 VQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADS 459
Query: 363 QPGVLIQVF*G 395
Q V I ++ G
Sbjct: 460 QSAVSIVIYEG 470
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +1
Query: 388 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
+EGER M DN+ LG F++TGIPPAPRGVPQ+ F+ID +GIL
Sbjct: 468 YEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGIL 511
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 84.2 bits (199), Expect = 5e-17
Identities = 51/131 (38%), Positives = 68/131 (51%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 343 EPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAA 401
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L GD V D GIET GG+MT LI RN +D
Sbjct: 402 IQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADG 457
Query: 363 QPGVLIQVF*G 395
Q V I+VF G
Sbjct: 458 QTQVQIKVFQG 468
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 382 KYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDIDXHGIL 519
K F+GER M N LLG+F L GIPPAPRGVPQ+ FDID +GI+
Sbjct: 464 KVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIV 509
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 81.0 bits (191), Expect = 5e-16
Identities = 50/131 (38%), Positives = 66/131 (50%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 182
EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 343 EPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAA 401
Query: 183 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 362
+L GD V D GIET GG+MT LI RN +D
Sbjct: 402 IQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADG 457
Query: 363 QPGVLIQVF*G 395
Q V I+VF G
Sbjct: 458 QTQVQIKVFQG 468
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 382 KYFEGERAMTKDNNLLGKFELTGI 453
K F+GER M N LLG+F L GI
Sbjct: 464 KVFQGEREMATSNKLLGQFSLVGI 487
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 66.9 bits (156), Expect = 8e-12
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +1
Query: 322 PLNRLRHSPPTLITNPEYSSKYFEGERAMTKDNNLLGKFELTGIPPAPRGVPQLRSPFDI 501
P + + P + S +EGER M DN+ LG F++TGIPPAPRGVPQ+ F+I
Sbjct: 77 PTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEI 136
Query: 502 DXHGIL 519
D +GIL
Sbjct: 137 DVNGIL 142
Score = 64.5 bits (150), Expect = 4e-11
Identities = 38/103 (36%), Positives = 50/103 (48%)
Frame = +3
Query: 87 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 266
IPKVQ+L++D+FNGKE ++ INPDE ++ G E D G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58
Query: 267 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF*G 395
IET GGVMT LI RN +D+Q V I ++ G
Sbjct: 59 IETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEG 101
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Frame = +3
Query: 9 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXX 185
VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE
Sbjct: 314 VERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAI 373
Query: 186 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 365
+L G +EEVQD G++ M+ LIK+ D Q
Sbjct: 374 MAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQ 431
Query: 366 PGVLIQVF*G 395
+ + V+ G
Sbjct: 432 TSINVPVYEG 441
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Frame = +3
Query: 9 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXX 185
VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE
Sbjct: 314 VERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAI 373
Query: 186 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 365
+L G +EEVQD G++ M+ LIK+ D Q
Sbjct: 374 MAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQ 431
Query: 366 PGVLIQVF*G 395
+ + V+ G
Sbjct: 432 TSINVPVYEG 441
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 3 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 161
EP+E++LR A++ I VL+G TR+PKVQ+++Q KE+ K +N DE
Sbjct: 350 EPIEQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 50.4 bits (115), Expect = 8e-07
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 6 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 158
P+ +L DA +D A + +IVLVGGST++P V+K++ FF K N ++P+
Sbjct: 348 PITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 6 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 161
P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 338 PILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 6 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 161
P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 354 PILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 48 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 161
+I +I +VGGS+RIP ++++++D F GKE ++N DE
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>AF043702-6|AAK21497.2| 306|Caenorhabditis elegans Hypothetical
protein W03D8.2 protein.
Length = 306
Score = 30.7 bits (66), Expect = 0.66
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = -1
Query: 419 LSLVIARSPSKYLDEY-SGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS-LNTEGKGCY 246
++LVI R + + Y G V+R GG +SLFS L+ GH +SS L E G
Sbjct: 206 IALVI-RGHQLFKEMYPQGCVLRFGGRLISLFS-----ALNYEGHKNNSSVLKLEFVGQR 259
Query: 245 IKQQQILHLLR 213
+K +Q+L+ R
Sbjct: 260 VKVKQVLYRCR 270
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 488 DLN*GTPRGAGGIPVSSNLPSKLLSLVI-ARSPSKYLDEYSGLVIRVGGECLSL 330
DLN P + SSN S L+ I A+ KY++EY + +++G CL L
Sbjct: 242 DLN--VPEEHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIGHICLGL 293
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 488 DLN*GTPRGAGGIPVSSNLPSKLLSLVI-ARSPSKYLDEYSGLVIRVGGECLSL 330
DLN P + SSN S L+ I A+ KY++EY + +++G CL L
Sbjct: 242 DLN--VPEEHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIGHICLGL 293
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 488 DLN*GTPRGAGGIPVSSNLPSKLLSLVI-ARSPSKYLDEYSGLVIRVGGECLSL 330
DLN P + SSN S L+ I A+ KY++EY + +++G CL L
Sbjct: 242 DLN--VPEEHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIGHICLGL 293
>Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical
protein H12D21.10 protein.
Length = 523
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -1
Query: 236 QQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQYN 60
Q ILH L + + L+ I L R F ++L+IKEIL+ L HL + S YN
Sbjct: 327 QFILHRLG-IRQPKADLEKARIVI-LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383
>Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical
protein C54C8.7 protein.
Length = 417
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 304 SVTLPSPLNRLRHSPPTLITNPEYSSKYFEGERAMTKDNNLLGKFELT 447
S T PS N P + T+P Y YF E T + LG + +T
Sbjct: 298 SSTNPSNCNAGLLMSPGVFTSPNYPQNYFNNENC-TYQLSTLGSYRIT 344
>AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.3 protein.
Length = 355
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 428 SKLLSLVIARSPSKYLDEYSGLVIRVGGECLSLFSGDGS 312
+ L+S+ +PS L + G + +GG+CL L +G G+
Sbjct: 80 TSLVSISSTHAPSNNLSCHIGFEL-IGGKCLQLLTGVGT 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,138,458
Number of Sequences: 27780
Number of extensions: 243787
Number of successful extensions: 741
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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