Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335B10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.36 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.36 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   7.7  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    21   7.7  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   7.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 156 SLYPNSHTFLYISPSKLALYYMDCGNLHDPRSRCIDV 46
           +L P +H   Y SPS   LYY++  +L    ++  DV
Sbjct: 256 ALSPVTHNLYYNSPSSENLYYVNTESLMKSENQGNDV 292


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -1

Query: 146 PILTHFFTYLLPSLLFIIWIVVIFMIHVPDALML 45
           P  TH  TY L  ++ + W  ++ +I+   +++L
Sbjct: 196 PTYTHEITYSLFGMIMMYWFPLVVIIYTYTSILL 229


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 220 RIVKTL*KVKPLVGIVGGTYT 282
           R+ KT     P+ G++GG+Y+
Sbjct: 60  RVKKTA-SAGPIFGVIGGSYS 79


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 220 RIVKTL*KVKPLVGIVGGTYT 282
           R+ KT     P+ G++GG+Y+
Sbjct: 150 RVKKTA-SAGPIFGVIGGSYS 169


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 36  LVKQHQCIWNVDHEDYHNPYNKEQ 107
           L   H  + +   +D+H PY ++Q
Sbjct: 144 LQNHHHHLQSTAVQDHHRPYQQQQ 167


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 186 ELKKKWNNVRDSYRKDV 236
           E+KKK    +DS  KDV
Sbjct: 129 EIKKKTTRFQDSRSKDV 145


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 186 ELKKKWNNVRDSYRKDV 236
           E+KKK    +DS  KDV
Sbjct: 129 EIKKKTTRFQDSRSKDV 145


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 186 ELKKKWNNVRDSYRKDV 236
           E+KKK    +DS  KDV
Sbjct: 129 EIKKKTTRFQDSRSKDV 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,980
Number of Sequences: 438
Number of extensions: 3219
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)