Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335B08f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 248 2e-66
04_01_0103 + 1082077-1082167,1083037-1085477 246 8e-66
02_04_0017 + 18937774-18937864,18938505-18940945 246 8e-66
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 215 2e-56
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 159 2e-39
03_05_0511 + 25056018-25059107 51 5e-07
02_04_0148 - 20198407-20201424 46 2e-05
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 35 0.034
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.56
06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027 29 1.7
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 29 3.0
10_08_0621 + 19328357-19329545,19329967-19329986 28 4.0
10_08_0081 + 14710478-14710822 28 4.0
10_01_0230 - 2433082-2434674 28 5.2
07_01_0244 + 1786009-1788048 28 5.2
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 5.2
11_06_0282 - 21884702-21885085 27 6.9
09_06_0081 + 20745627-20748144,20748211-20748308 27 9.1
08_02_0527 + 18212938-18213257,18213352-18213991 27 9.1
08_01_1032 + 10447474-10448030,10448784-10449813 27 9.1
03_05_0985 - 29424698-29425183 27 9.1
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 27 9.1
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 248 bits (608), Expect = 2e-66
Identities = 118/176 (67%), Positives = 143/176 (81%), Gaps = 3/176 (1%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLF 178
I+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNRL+
Sbjct: 525 IIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLY 584
Query: 179 MKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILV 358
M+A+PM +GLPE IDEGR+ PRDD K R++ L+E++ +D A+KIWCFGPE TGPNI+V
Sbjct: 585 MEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVV 644
Query: 359 DCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENL--RGVRFXIYDVTLHTDAIHRG 520
D KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+ RG+ F + DV LH+DAIHRG
Sbjct: 645 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIHRG 700
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 246 bits (602), Expect = 8e-66
Identities = 114/174 (65%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLF 178
I+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNRL+
Sbjct: 529 IIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLY 588
Query: 179 MKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILV 358
M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWCFGPE TGPN++V
Sbjct: 589 MEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVV 648
Query: 359 DCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
D KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRG
Sbjct: 649 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRG 702
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 246 bits (602), Expect = 8e-66
Identities = 114/174 (65%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLF 178
I+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNRL+
Sbjct: 529 IIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLY 588
Query: 179 MKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILV 358
M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D A+KIWCFGPE TGPN++V
Sbjct: 589 MEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVV 648
Query: 359 DCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
D KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH DAIHRG
Sbjct: 649 DMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRG 702
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 215 bits (525), Expect = 2e-56
Identities = 102/182 (56%), Positives = 136/182 (74%), Gaps = 9/182 (4%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLF 178
++AG G+LHLEIC+KDL+ED I P+++YRETV + S + +SKSPNKHNRL+
Sbjct: 531 VIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNRLY 590
Query: 179 MKAQPMP-DGLPED-------IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPE 334
M+A+P+ + L +D ID+ R+ P+DD K R + L+E++ +D A+KIW FGPE
Sbjct: 591 MEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPE 650
Query: 335 GTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIH 514
GPN+LVD KGVQYL+EIKDSVVAGFQWA+KEG +AEEN+RGV F + DVTLH+D+IH
Sbjct: 651 TKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSIH 710
Query: 515 RG 520
RG
Sbjct: 711 RG 712
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 159 bits (385), Expect = 2e-39
Identities = 73/176 (41%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Frame = +2
Query: 5 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMK 184
+ G GEL+L+ +KDL E ++ + +K +DPVV++ ETV + S C +++PNK N++ M
Sbjct: 653 ILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMV 712
Query: 185 AQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDC 364
A+P+ GL EDI+ G V+ K + ++Y++DV AR IW FGPE GPNIL+D
Sbjct: 713 AEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILLDD 772
Query: 365 SKGVQ----YLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
+ V+ LN +KDS+V GFQW A+EG + +E +R V+F I + + + +HRG
Sbjct: 773 TLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHRG 828
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLS-KSPNK 163
++A AGE+HLE C KDLEE A + + SDP+VS++ET+ E L S K+P +
Sbjct: 578 VLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGEGLALIESLKAPRE 632
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/42 (42%), Positives = 32/42 (76%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 127
++A AGE+HLE C+K+L+E A + ++ S P+VS+++T+ E
Sbjct: 558 VLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGE 599
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 35.1 bits (77), Expect = 0.034
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAE--ESDQLCLSKS--PNKHN 169
I++G GELHL+I ++ + ++ + K P V++RET+ + E D L +S ++
Sbjct: 520 IISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFRETITQRAEFDYLHKKQSGGQGQYG 578
Query: 170 RLFMKAQPMP 199
R+ +P+P
Sbjct: 579 RVCGYIEPLP 588
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 133
++ G GELHL+I + L+ + + P V+YRE++++ S+
Sbjct: 500 VIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYRESISKISE 542
>06_03_0555 + 22080522-22080845,22081190-22081290,22081916-22082027
Length = 178
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 306 PVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSGPLRK 437
P R PR+ PTS + P+E +T+ + W D G +R+
Sbjct: 58 PARLRVARPRIQRPTSSHVEPEEVTTASR-----WRDGRGSVRR 96
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 125 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPE 214
E + LCL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 293 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEG 439
DVT +R+I P G G I + GV +L S+V F+W G
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAG 369
>10_08_0081 + 14710478-14710822
Length = 114
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 159 LGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSS-SRSLRQISRWSSPAPAT 4
+ R SWSD V+R T+ + + W+ R +R S WSS AP T
Sbjct: 1 MSHLRRLSWSDQ--VVARQPTSEEEDVDAGGRWTEVRRKVRPHSWWSSNAPTT 51
>10_01_0230 - 2433082-2434674
Length = 530
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 293 DVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 472
D+T R+I P G G I +L ++VA F+W A EG + + +
Sbjct: 452 DITGTREIRMM-PFGAGRRICPGLGVATLHLEYFVANMVAAFEWRAAEGEAVDVDGEKLE 510
Query: 473 FXI 481
F +
Sbjct: 511 FTV 513
>07_01_0244 + 1786009-1788048
Length = 679
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 199 RHGLSLHEQTVVLVGRL*ETELVRFLSY 116
RHG++ ++++GRL LVR L Y
Sbjct: 397 RHGMTQFTAEIIILGRLRHRNLVRLLGY 424
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 445 HNSFLSGPLESSHNRVLNFIEVLNSF 368
HN L+ +E+SH VL FI +L SF
Sbjct: 183 HNGNLTNRMETSHEEVLPFIFLLLSF 208
>11_06_0282 - 21884702-21885085
Length = 127
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 215 DIDEGRVNPRDDFKTRARYLTEKYEYDVTEARK 313
++D G V+P DDF ++ Y+ + D+ RK
Sbjct: 43 EVDAGVVDPDDDFYYKSLYVLHESSKDLRHVRK 75
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 237 IPAMTSR-LALGILQ---KSTNTMLPKPVRFGALAPRVPAPTSWSIAP 368
+P M S LAL L ++ +P P A AP V AP W+++P
Sbjct: 564 VPRMPSAPLALRALAPHLRALRVSVPHPRASSAPAPPVAAPRGWTVSP 611
>08_02_0527 + 18212938-18213257,18213352-18213991
Length = 319
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 189 SPCLMVCQRTLMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSWSIAP 368
+PC + R L VA I A+T R ++GI +S ++ F AP +PA TS + +P
Sbjct: 33 APCSVELCRGL--VAQIVALTDR-SIGIATRSFSSASGGGAHFADTAPPMPALTSCTPSP 89
>08_01_1032 + 10447474-10448030,10448784-10449813
Length = 528
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Frame = +2
Query: 293 DVTEARKIW------CFGPEGTGPNILVDC 364
D+ EA++IW C P+GT ++V C
Sbjct: 262 DIAEAKRIWREMSNYCITPDGTSYTLMVSC 291
>03_05_0985 - 29424698-29425183
Length = 161
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 212 EDIDEGRVNPRDDFKTRARYLTEKY 286
ED D G ++PR D K R+L KY
Sbjct: 8 EDEDLGIIDPRSDDKALKRHLLRKY 32
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 171 RLCLLGDFERQSWSDSSATVSRYDTTGSDFLI-GMQAWSSSRS 46
RLC+ D E + D A+ RY+ +G +L+ G+ + S R+
Sbjct: 524 RLCISLDAELKEMQDRMASRQRYEASGRAYLLSGLSSHSWQRA 566
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,875,735
Number of Sequences: 37544
Number of extensions: 359221
Number of successful extensions: 1181
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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