Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335B08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 313 6e-86
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 307 3e-84
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 137 4e-33
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 133 6e-32
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.001
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.16
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 29 1.5
L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical p... 29 2.7
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 28 4.7
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 4.7
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 6.2
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 6.2
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 27 6.2
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 313 bits (768), Expect = 6e-86
Identities = 138/173 (79%), Positives = 157/173 (90%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFM 181
I+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL
Sbjct: 539 IIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHC 598
Query: 182 KAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVD 361
AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDVTEARKIWCFGP+GTGPN+L+D
Sbjct: 599 TAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMD 658
Query: 362 CSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
+KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRF ++DVTLH DAIHRG
Sbjct: 659 VTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRG 711
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 307 bits (754), Expect = 3e-84
Identities = 136/173 (78%), Positives = 156/173 (90%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFM 181
I+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL
Sbjct: 539 IIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHC 598
Query: 182 KAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVD 361
AQPMPDGL +DI+ G V+ RD+FK RA+Y EKYEY VTEARKIWCFGP+GTGPN+L+D
Sbjct: 599 TAQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMD 658
Query: 362 CSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
+KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRF ++DVTLH DAIHRG
Sbjct: 659 VTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRG 711
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 137 bits (332), Expect = 4e-33
Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 4/177 (2%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFM 181
++ G GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M
Sbjct: 632 VLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITM 691
Query: 182 KAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVD 361
A+P+ L EDI+ V + + + KY +D+ AR IW FGP+ TGPNIL+D
Sbjct: 692 MAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGPNILLD 751
Query: 362 ----CSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
L+ +++S+V GFQWA +EG + EE +R V+F + D + T+ ++RG
Sbjct: 752 DTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRG 808
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 133 bits (322), Expect = 6e-32
Identities = 64/177 (36%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFM 181
++ G GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M
Sbjct: 507 VLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITM 566
Query: 182 KAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVD 361
A+P+ L EDI+ V + + + KY +D+ AR IW FG + TGPNIL+D
Sbjct: 567 MAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTTGPNILLD 626
Query: 362 ----CSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFXIYDVTLHTDAIHRG 520
L+ +++S+V GFQWA +EG + EE +R V+F + D + T+ ++RG
Sbjct: 627 DTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRG 683
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 14 AGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 130
AGE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 522 AGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 14 AGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 130
AGE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 522 AGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +2
Query: 2 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFM 181
IV+G GELHLEI + ++ ++ C P++ P V+YRE + K F
Sbjct: 489 IVSGMGELHLEIYAQRMKSEYNC-PVELGKPTVAYRECLGSPYKFHFRHKKQTGGQGQFG 547
Query: 182 KAQPMPDGLPED 217
+ + + D LP D
Sbjct: 548 EIEGVIDPLPSD 559
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 65 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 244
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 245 DDFKT 259
D KT
Sbjct: 287 CDCKT 291
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 5 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMK 184
V GA E+ LE ++ + D A I + PVV+ R A+ ++S +
Sbjct: 293 VTGAAEI-LEFPEEEKKIDMATIHRTPTPPVVASRPATAKAPGTPA-NRSATALEAKSVS 350
Query: 185 AQPMPDGLPEDIDEGRVNPRDD 250
QP P+ E+ DEG + DD
Sbjct: 351 QQPTPESSEEEEDEGNGDEDDD 372
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 249 TSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSG 425
+S L I+Q+ +N P P A +PR APT ++ KE S ++ +L + SG
Sbjct: 97 SSELRNSIMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSNVLLVGPSG 151
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 249 TSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSG 425
+S L I+Q+ +N P P A +PR APT ++ KE S ++ +L + SG
Sbjct: 213 SSELRNSIMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSNVLLVGPSG 267
>L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical
protein R05D3.12 protein.
Length = 144
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 101 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 280
+Y VA DQ+ + +++ ++ K P GL + DE VN D+ +R
Sbjct: 62 TYIGGVAMREDQIIWLRD-SENRKMIAKEVTYPPGLLKIFDEILVNAADNKARDSRIYVL 120
Query: 281 KYEYDVTEARKIWCFG 328
+ YD T +R CFG
Sbjct: 121 RQSYD-TLSRHDNCFG 135
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 221 DEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKD 400
+ GR P+ F R +YL + +++A++ GP P+ + + KG +N I
Sbjct: 61 ENGRFLPKTSFNARRQYLCAEETGYLSKAQQRPAKGPNPMDPSQMTEMLKG-NMMNMIPM 119
Query: 401 SVVAGF 418
VV G+
Sbjct: 120 IVVGGW 125
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 390 KLRTLLWLDSSGPLRKELWLKRICVVFD 473
K++TL+W PL KEL L+R+ V D
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTD 283
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 390 KLRTLLWLDSSGPLRKELWLKRICVVFD 473
K++TL+W PL KEL L+R+ V D
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTD 297
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 179 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 316
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 140 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 226
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 74 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 202
P S+ V + R+T E+ Q ++K+P+ N ++ P+P+
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 313 LTGFGNIVFVLFCKIPSASLEVIAGIYATLINVLWQTIRHGLS 185
+ GF + ++F I ++ I GIY L +L+ + H +S
Sbjct: 129 VNGFNYVSAMIFIIIGGSTFMSITGIYIVLTVILYMAVAHHIS 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,780,133
Number of Sequences: 27780
Number of extensions: 281814
Number of successful extensions: 908
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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