Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335B05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023802-1|AAZ66309.1|  872|Drosophila melanogaster RE68448p pro...    28   8.8  
AY119611-1|AAM50265.1|  773|Drosophila melanogaster LD35363p pro...    28   8.8  
AE014297-1106|AAF54500.1|  872|Drosophila melanogaster CG6241-PA...    28   8.8  

>BT023802-1|AAZ66309.1|  872|Drosophila melanogaster RE68448p
           protein.
          Length = 872

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 49  KQNHRFDENFVLLNVIKIMYVC*YLFLNL 135
           KQ H FD N   LN+IK +YV   + LN+
Sbjct: 248 KQLHNFDRNIYCLNIIK-LYVVLGIALNM 275


>AY119611-1|AAM50265.1|  773|Drosophila melanogaster LD35363p
           protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 49  KQNHRFDENFVLLNVIKIMYVC*YLFLNL 135
           KQ H FD N   LN+IK +YV   + LN+
Sbjct: 149 KQLHNFDRNIYCLNIIK-LYVVLGIALNM 176


>AE014297-1106|AAF54500.1|  872|Drosophila melanogaster CG6241-PA
           protein.
          Length = 872

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 49  KQNHRFDENFVLLNVIKIMYVC*YLFLNL 135
           KQ H FD N   LN+IK +YV   + LN+
Sbjct: 248 KQLHNFDRNIYCLNIIK-LYVVLGIALNM 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,768,559
Number of Sequences: 53049
Number of extensions: 337499
Number of successful extensions: 429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)