BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335B04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070068-1|AAH70068.1| 543|Homo sapiens headcase homolog (Droso... 32 1.1
AL031772-1|CAB94782.1| 543|Homo sapiens RP1-225E12.1 protein. 32 1.1
AB033496-1|BAA85333.1| 543|Homo sapiens homolog of Drosophila h... 32 1.1
AB033492-1|BAA85322.1| 543|Homo sapiens homolog of Drosophila h... 32 1.1
S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein. 29 7.5
S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrat... 29 7.5
BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substr... 29 7.5
>BC070068-1|AAH70068.1| 543|Homo sapiens headcase homolog
(Drosophila) protein.
Length = 543
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 28 YSDYSHPVTCPQCRVTDTHFVKPLT 102
+S+YS+ CP C D HFVKP +
Sbjct: 511 FSEYSNVQQCPHCGNLDYHFVKPFS 535
>AL031772-1|CAB94782.1| 543|Homo sapiens RP1-225E12.1 protein.
Length = 543
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 28 YSDYSHPVTCPQCRVTDTHFVKPLT 102
+S+YS+ CP C D HFVKP +
Sbjct: 511 FSEYSNVQQCPHCGNLDYHFVKPFS 535
>AB033496-1|BAA85333.1| 543|Homo sapiens homolog of Drosophila
headcase protein.
Length = 543
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 28 YSDYSHPVTCPQCRVTDTHFVKPLT 102
+S+YS+ CP C D HFVKP +
Sbjct: 511 FSEYSNVQQCPHCGNLDYHFVKPFS 535
>AB033492-1|BAA85322.1| 543|Homo sapiens homolog of Drosophila
headcase protein.
Length = 543
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 28 YSDYSHPVTCPQCRVTDTHFVKPLT 102
+S+YS+ CP C D HFVKP +
Sbjct: 511 FSEYSNVQQCPHCGNLDYHFVKPFS 535
>S85963-1|AAB21608.1| 1243|Homo sapiens hIRS-1 protein.
Length = 1243
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 110 SPNGFTHYSSSGHKQSAVPGTSPGTSPASA 199
+PNG S G+ PGT GTSPA A
Sbjct: 479 APNGHYILSRGGNGHRCTPGTGLGTSPALA 508
>S62539-1|AAB27175.1| 1242|Homo sapiens insulin receptor substrate-1
protein.
Length = 1242
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 110 SPNGFTHYSSSGHKQSAVPGTSPGTSPASA 199
+PNG S G+ PGT GTSPA A
Sbjct: 478 APNGHYILSRGGNGHRCTPGTGLGTSPALA 507
>BC053895-1|AAH53895.1| 1242|Homo sapiens insulin receptor substrate
1 protein.
Length = 1242
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 110 SPNGFTHYSSSGHKQSAVPGTSPGTSPASA 199
+PNG S G+ PGT GTSPA A
Sbjct: 478 APNGHYILSRGGNGHRCTPGTGLGTSPALA 507
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,220,064
Number of Sequences: 237096
Number of extensions: 1568194
Number of successful extensions: 3737
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3737
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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