Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335B02f
(362 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 170 5e-44
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 167 5e-43
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 161 4e-41
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 7e-34
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 110 7e-26
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 72 3e-14
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 51 6e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 34 0.008
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 29 0.17
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 3.6
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 3.6
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 25 3.6
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 25 4.8
SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 8.3
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc... 24 8.3
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 8.3
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 170 bits (414), Expect = 5e-44
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 275
+IGIDLGTTYSCVG + + VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
T+FDAKRLIGRKFDDP +Q DMKHWPFKV
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKV 92
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 167 bits (406), Expect = 5e-43
Identities = 74/89 (83%), Positives = 83/89 (93%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 275
+IGIDLGTTYSCVG + + VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
T+FDAKRLIGR+F+DP +Q DMKHWPFKV
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKV 92
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 161 bits (390), Expect = 4e-41
Identities = 70/89 (78%), Positives = 80/89 (89%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 275
AIGIDLGTTYSCV VW+ NVEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A+NP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
TVFDAKRLIGR+++DP Q+D+KHWPFKV
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKV 96
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 136 bits (330), Expect = 7e-34
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNT 278
IGIDLGTTYSCV V ++G VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 279 VFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
+FD KRLIGRKFD+ + +D+K +PF +
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHI 125
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 110 bits (264), Expect = 7e-26
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Frame = +3
Query: 87 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 263
K P IGIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 264 NPNNTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
NP NT F KRLIGR+F +P +Q+D+K P+K+
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKI 141
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 71.7 bits (168), Expect = 3e-14
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNT 278
+GID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A N NT
Sbjct: 8 VGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNT 67
Query: 279 VFDAKRLIGRKFDDPXIQ 332
V KRL GR +DDP I+
Sbjct: 68 VGSLKRLAGRTYDDPEIK 85
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 50.8 bits (116), Expect = 6e-08
Identities = 22/74 (29%), Positives = 42/74 (56%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNT 278
IGI G S + + G +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 279 VFDAKRLIGRKFDD 320
V + + L+G+ D+
Sbjct: 87 VTNFRDLLGKSHDE 100
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 33.9 bits (74), Expect = 0.008
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 84 FKMPAIGIDLGTTYSCVGVWQHG-NVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 260
F + ID GT ++ + + G +EI+ R S VAF ER+ G A N
Sbjct: 20 FASSVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLAT 79
Query: 261 LNPNNTVFDAKRLI 302
P +++ + K L+
Sbjct: 80 RFPAHSIRNVKELL 93
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.5 bits (63), Expect = 0.17
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 204 VAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
+ F+D E GD A L P + AK L+G+ D I D P++V
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQV 177
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 3.6
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -2
Query: 310 FLPISLFASNTVLLGFKATWFLA 242
+LP+++F + ++LGF +F A
Sbjct: 535 YLPLAIFIDSELILGFPPKYFFA 557
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.0 bits (52), Expect = 3.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 102 GIDLGTTYSCVGVWQHGNVEIIANDQGNR 188
G LG TY+ V Q G+VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 25.0 bits (52), Expect = 3.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 255 VALNPNNTVFDAKRLIGRKFD 317
++ N N+TV DAK +G++ D
Sbjct: 14 LSFNENDTVLDAKEKLGQEID 34
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 24.6 bits (51), Expect = 4.8
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 162 IIANDQGNRTTPSY-VAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPXIQ 332
+IA D+ N ++ +A + + L+ + + LN TVF ++++GR + +P Q
Sbjct: 281 LIAGDRSNVNVIAHELAHSWSGNLVTNESWQCFWLNEGMTVFLERKILGRLYGEPTRQ 338
>SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 151
Score = 23.8 bits (49), Expect = 8.3
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 304 PISLFASNTVLLGFKATWFLAASPMRRSVSV-NATYDGVVRLP 179
P+S+ ASN KA+ ++ A+P R S S +A+ + RLP
Sbjct: 63 PVSINASNAAPSNLKAS-YIPANPRRLSSSTSSASSPPLRRLP 104
>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 536
Score = 23.8 bits (49), Expect = 8.3
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 244 AASPMRRSVSVNATYDGVVRLPWSFAMISTFPCCHTPTHEYVVP 113
A S R + + + GV+ P F PC TPT++ P
Sbjct: 438 AKSRSTRGLRIRSYEAGVLLYPKLFEESQRAPCIMTPTYKTNTP 481
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.8 bits (49), Expect = 8.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 174 DQGNRTTPSYVAFTDTERLIGDAAKNQVA 260
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,369,216
Number of Sequences: 5004
Number of extensions: 26839
Number of successful extensions: 73
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 112046990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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