Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335B02f
(362 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 180 3e-46
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 180 3e-46
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 157 2e-39
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 156 4e-39
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 156 4e-39
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 146 3e-36
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 146 4e-36
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 146 4e-36
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 100 4e-22
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 100 4e-22
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 99 1e-21
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 99 1e-21
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 74 3e-14
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 27 3.0
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 27 3.0
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 27 3.0
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 27 3.0
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 27 3.0
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 27 3.0
Z69883-2|CAA93740.1| 264|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 27 5.3
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 5.3
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 5.3
Z70271-5|CAA94233.2| 443|Caenorhabditis elegans Hypothetical pr... 26 7.0
AF031477-1|AAC15586.1| 443|Caenorhabditis elegans delta6-fatty-... 26 7.0
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 180 bits (438), Expect = 3e-46
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = +3
Query: 87 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALN 266
K A+GIDLGTTYSCVGV+ HG VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+N
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
Query: 267 PNNTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
P+NTVFDAKRLIGRKFDDP +Q DMKHWPFKV
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKV 94
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 180 bits (438), Expect = 3e-46
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = +3
Query: 87 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALN 266
K A+GIDLGTTYSCVGV+ HG VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+N
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 62
Query: 267 PNNTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
P+NTVFDAKRLIGRKFDDP +Q DMKHWPFKV
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKV 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 157 bits (382), Expect = 2e-39
Identities = 68/89 (76%), Positives = 80/89 (89%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 275
AIGIDLGTTYSCVG++Q+G VEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A NP N
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPEN 65
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
TVFDAKRLIGR+FD+ +Q D+KHWPF V
Sbjct: 66 TVFDAKRLIGRRFDEETVQSDIKHWPFTV 94
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 156 bits (379), Expect = 4e-39
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 275
AIGIDLGTTYSCVG++Q+G VEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A NP N
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPEN 65
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
TVFDAKRLIGR+FD+ +Q D KHWPF V
Sbjct: 66 TVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 156 bits (379), Expect = 4e-39
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 275
AIGIDLGTTYSCVG++Q+G VEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A NP N
Sbjct: 6 AIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAARNPEN 65
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
TVFDAKRLIGR+FD+ +Q D KHWPF V
Sbjct: 66 TVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 146 bits (355), Expect = 3e-36
Identities = 66/90 (73%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVALNPN 272
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 273 NTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
NT+FDAKRLIGR +++ +QQD+KHWPFK+
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKI 122
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 146 bits (354), Expect = 4e-36
Identities = 66/90 (73%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVALNPN 272
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 273 NTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
NT+FDAKRLIGR ++D +Q D+KHWPFKV
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKV 125
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 146 bits (354), Expect = 4e-36
Identities = 66/90 (73%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVALNPN 272
IGIDLGTTYSCVGV+++G VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 273 NTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
NT+FDAKRLIGR ++D +Q D+KHWPFKV
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKV 125
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 100 bits (239), Expect = 4e-22
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPNN 275
IGIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q N N
Sbjct: 34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSAN 93
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
T+F KRLIGR+++DP +Q+D+K P+K+
Sbjct: 94 TLFATKRLIGRRYEDPEVQKDLKVVPYKI 122
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 100 bits (239), Expect = 4e-22
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +3
Query: 99 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPNN 275
IGIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q N N
Sbjct: 34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSAN 93
Query: 276 TVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
T+F KRLIGR+++DP +Q+D+K P+K+
Sbjct: 94 TLFATKRLIGRRYEDPEVQKDLKVVPYKI 122
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 98.7 bits (235), Expect = 1e-21
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVALNPN 272
+IGIDLGTT+SCV +Q+G V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 273 NTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
N++FD KR+IGR++DD +Q+DM WPFKV
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKV 90
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 98.7 bits (235), Expect = 1e-21
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +3
Query: 96 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVALNPN 272
+IGIDLGTT+SCV +Q+G V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 273 NTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
N++FD KR+IGR++DD +Q+DM WPFKV
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKV 90
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 74.5 bits (175), Expect = 2e-14
Identities = 37/91 (40%), Positives = 51/91 (56%)
Frame = +3
Query: 90 MPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNP 269
M +G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 1 MSVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNI 60
Query: 270 NNTVFDAKRLIGRKFDDPXIQQDMKHWPFKV 362
NTV + K LIGRKF DP Q+ + P KV
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKV 91
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 74.1 bits (174), Expect = 3e-14
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = +3
Query: 102 GIDLGTTYSCVGVWQH--GNVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVALNPN 272
GIDLGTTYS +G++ G I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 273 NTVFDAKRLIGRKFD--DPXIQQDMKHWPFKV 362
T++DAKR IGR F+ + D K +PFK+
Sbjct: 97 RTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKI 128
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 87 KMPAIGIDLGTTYSCVGVWQHG-NVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 263
++ A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 23 QLAAMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVR 82
Query: 264 NPNNTVFDAKRLIGRKFDDPXIQ 332
P+ L+G+ P +
Sbjct: 83 YPHLVHGQLNDLVGKSTQHPSFE 105
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 301 ISLFASNTVLLGFKATWFLAASPMRRSVSVNATYDGVVR--LPWSFAM 164
I+ N VL+GFK+ W+ P +++ Y G ++ W+ AM
Sbjct: 827 IAKMKPNIVLMGFKSNWY-KGGPTETNLNEMNEYFGTIQDVFDWNMAM 873
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 301 ISLFASNTVLLGFKATWFLAASPMRRSVSVNATYDGVVR--LPWSFAM 164
I+ N VL+GFK+ W+ P +++ Y G ++ W+ AM
Sbjct: 827 IAKMKPNIVLMGFKSNWY-KGGPTETNLNEMNEYFGTIQDVFDWNMAM 873
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 214 VNATYDGVVRLPWSFAMISTFPCCH 140
+NA+Y + R WSFA++S CH
Sbjct: 560 MNASYAALHRPMWSFALLSFVYLCH 584
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 214 VNATYDGVVRLPWSFAMISTFPCCH 140
+NA+Y + R WSFA++S CH
Sbjct: 560 MNASYAALHRPMWSFALLSFVYLCH 584
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 301 ISLFASNTVLLGFKATWFLAASPMRRSVSVNATYDGVVR--LPWSFAM 164
I+ N VL+GFK+ W+ P +++ Y G ++ W+ AM
Sbjct: 827 IAKMKPNIVLMGFKSNWY-KGGPTETNLNEMNEYFGTIQDVFDWNMAM 873
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 301 ISLFASNTVLLGFKATWFLAASPMRRSVSVNATYDGVVR--LPWSFAM 164
I+ N VL+GFK+ W+ P +++ Y G ++ W+ AM
Sbjct: 827 IAKMKPNIVLMGFKSNWY-KGGPTETNLNEMNEYFGTIQDVFDWNMAM 873
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 214 VNATYDGVVRLPWSFAMISTFPCCH 140
+NA+Y + R WSFA++S CH
Sbjct: 560 MNASYAALHRPMWSFALLSFVYLCH 584
>Z69883-2|CAA93740.1| 264|Caenorhabditis elegans Hypothetical
protein C27C12.1 protein.
Length = 264
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 308 PPDQPLRVEHGVVRVQGDLVLGCVADETLRVRERDVRWCSTVALVVRDDLHVPVLPYSN 132
PPD+ ++ H + + + +L DE+L + + + CSTV+ + L P LP N
Sbjct: 14 PPDEVEKLLHSMKQAKEELETLGNGDESLFLCPQKITHCSTVSWKPNNVL-APALPKQN 71
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 266 VQGDLVLGCVADETLRVRERDV-RWCSTVALVVRDDLHVPVLPYSNT 129
V DL C + ++ + RW S + L ++DD P+ P++ +
Sbjct: 282 VSDDLYFDCTDTSPIPTQKPSIIRWSSELELEIQDDNSPPLTPHNGS 328
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 266 VQGDLVLGCVADETLRVRERDV-RWCSTVALVVRDDLHVPVLPYSNT 129
V DL C + ++ + RW S + L ++DD P+ P++ +
Sbjct: 282 VSDDLYFDCTDTSPIPTQKPSIIRWSSELELEIQDDNSPPLTPHNGS 328
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 258 ALNPNNTVFDAKRLIGRKFDDPXIQQD 338
AL P+ + A R++ FDD +QQD
Sbjct: 3944 ALRPDRLMASAHRVVSTAFDDHFMQQD 3970
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 258 ALNPNNTVFDAKRLIGRKFDDPXIQQD 338
AL P+ + A R++ FDD +QQD
Sbjct: 3944 ALRPDRLMASAHRVVSTAFDDHFMQQD 3970
>Z70271-5|CAA94233.2| 443|Caenorhabditis elegans Hypothetical
protein W08D2.4 protein.
Length = 443
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -2
Query: 301 ISLFASNTVLLGFKATWFLAASPMRRSVSVNATYDGVVRLPWSFAMISTFPCCHTPTHEY 122
ISLF N L GF W+ + + +DG + L FA I C + + E
Sbjct: 185 ISLFFGN-FLQGFSRDWWKDKHNTHHAATNVIDHDGDIDLAPLFAFIPGDLCKYKASFEK 243
Query: 121 VVPKSIP 101
+ K +P
Sbjct: 244 AILKIVP 250
>AF031477-1|AAC15586.1| 443|Caenorhabditis elegans
delta6-fatty-acid-desaturase protein.
Length = 443
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -2
Query: 301 ISLFASNTVLLGFKATWFLAASPMRRSVSVNATYDGVVRLPWSFAMISTFPCCHTPTHEY 122
ISLF N L GF W+ + + +DG + L FA I C + + E
Sbjct: 185 ISLFFGN-FLQGFSRDWWKDKHNTHHAATNVIDHDGDIDLAPLFAFIPGDLCKYKASFEK 243
Query: 121 VVPKSIP 101
+ K +P
Sbjct: 244 AILKIVP 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,620,089
Number of Sequences: 27780
Number of extensions: 150304
Number of successful extensions: 456
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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