Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS335B01f
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 123 7e-29
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 123 7e-29
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 122 1e-28
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 120 5e-28
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 48 3e-06
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical pr... 27 7.9
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 123 bits (297), Expect = 7e-29
Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Frame = +2
Query: 5 VGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGIDVGSH 184
V D PGF+ R L M +E +RLLQEGVDP ELD +T +FGFPVGAATLADEVG+DV H
Sbjct: 530 VKDCPGFFVVRCLGPMTAEIMRLLQEGVDPAELDKLTTKFGFPVGAATLADEVGLDVAEH 589
Query: 185 IAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGXRFLCV*KRX*KQGSKPWCY*NPER 364
+A L KA G R+ GG+ ++ +LV+AG+ GRK+G K+GSK N E
Sbjct: 590 VAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTGKGIFVY--GDGKKGSKKV---NDEA 644
Query: 365 QVCIRTSWC*YC*RPTTANGXQI------CNGSXVSLEEKILHTPLEGDVGAVF 508
++ ++ QI N + + LEE +L +P +GD+ +VF
Sbjct: 645 TKLLQKYKLTPNASVSSPEDRQIRLVSRFVNEALLCLEEGVLASPSDGDIASVF 698
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +3
Query: 291 KGFYVYEKGSK-NREVNHGAIKILKDKYALEPRGA-NTVEDQQLRMVXRFVMEA 446
KG +VY G K +++VN A K+L+ KY L P + ++ ED+Q+R+V RFV EA
Sbjct: 625 KGIFVYGDGKKGSKKVNDEATKLLQ-KYKLTPNASVSSPEDRQIRLVSRFVNEA 677
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 123 bits (297), Expect = 7e-29
Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Frame = +2
Query: 5 VGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGIDVGSH 184
V D PGF+ R L M +E +RLLQEGVDP ELD +T +FGFPVGAATLADEVG+DV H
Sbjct: 556 VKDCPGFFVVRCLGPMTAEIMRLLQEGVDPAELDKLTTKFGFPVGAATLADEVGLDVAEH 615
Query: 185 IAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGXRFLCV*KRX*KQGSKPWCY*NPER 364
+A L KA G R+ GG+ ++ +LV+AG+ GRK+G K+GSK N E
Sbjct: 616 VAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTGKGIFVY--GDGKKGSKKV---NDEA 670
Query: 365 QVCIRTSWC*YC*RPTTANGXQI------CNGSXVSLEEKILHTPLEGDVGAVF 508
++ ++ QI N + + LEE +L +P +GD+ +VF
Sbjct: 671 TKLLQKYKLTPNASVSSPEDRQIRLVSRFVNEALLCLEEGVLASPSDGDIASVF 724
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +3
Query: 291 KGFYVYEKGSK-NREVNHGAIKILKDKYALEPRGA-NTVEDQQLRMVXRFVMEA 446
KG +VY G K +++VN A K+L+ KY L P + ++ ED+Q+R+V RFV EA
Sbjct: 651 KGIFVYGDGKKGSKKVNDEATKLLQ-KYKLTPNASVSSPEDRQIRLVSRFVNEA 703
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 122 bits (295), Expect = 1e-28
Identities = 56/95 (58%), Positives = 71/95 (74%)
Frame = +2
Query: 5 VGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGIDVGSH 184
V D PGF+ R L M +E +RLLQEGVDP ELD +T +FGFPVGAATLADEVG+DV H
Sbjct: 556 VKDCPGFFVVRCLGPMTAEIMRLLQEGVDPAELDKLTTKFGFPVGAATLADEVGLDVAEH 615
Query: 185 IAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSG 289
+A L KA G R+ GG+ ++ +LV+AG+ GRK+G
Sbjct: 616 VAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTG 650
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 291 KGFYVYEKGSK-NREVNHGAIKILKDKYALEPRGA 392
KG +VY G K +++VN A K+L+ KY L P +
Sbjct: 651 KGIFVYGDGKKGSKKVNDEATKLLQ-KYKLTPNAS 684
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 120 bits (290), Expect = 5e-28
Identities = 55/94 (58%), Positives = 71/94 (75%)
Frame = +2
Query: 5 VGDGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFGFPVGAATLADEVGIDVGSH 184
V D PGF+ R LS M+SE VRLLQEGV+P ELD +T +FGFPVGAATLADE G+DV H
Sbjct: 530 VKDCPGFFVVRCLSPMMSEIVRLLQEGVEPSELDKLTTKFGFPVGAATLADEAGLDVAEH 589
Query: 185 IAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKS 286
+A L A G R+ GG++ ++ +LV+AG+ GRK+
Sbjct: 590 VARYLGTALGPRVHGGSVDLLSELVRAGHKGRKT 623
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +3
Query: 288 AKGFYVYEKGSK-NREVNHGAIKILKDKYALEP-RGANTVEDQQLRMVXRFVMEA 446
+KG +VY G+K +++VN A K+ +KY L P + ++ ED+QLR+V RFV EA
Sbjct: 624 SKGIFVYGDGAKGSKKVNQEAAKLF-EKYKLTPIKSVSSPEDRQLRLVSRFVNEA 677
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 49.6 bits (113), Expect = 1e-06
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +2
Query: 11 DGPGFYTTRILSTMLSEAVRLLQEG-VDPKELDNMTKQ-FGFPVGAATLADEVGIDVGSH 184
D PGF R+L + EA+RL + G +++D K G+P+G L+D VG+D
Sbjct: 208 DTPGFIVNRLLVPYMFEALRLYERGDASMEDIDVAMKLGAGYPMGPFELSDYVGLDTCKF 267
Query: 185 IAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGXRF 298
I + + ++ ++ LV +G GRKSG F
Sbjct: 268 IMDGWHAQYPEEVAFTPSPLLNSLVDSGKNGRKSGEGF 305
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = +2
Query: 11 DGPGFYTTRILSTMLSEAVRLLQEGVDPKELDNMTKQFG--FPVGAATLADEVGIDVGSH 184
D PGF R+L L +++R+L+ G KE + +FG +P+G L D VG+DV
Sbjct: 199 DTPGFIVNRLLIPYLMDSIRMLERGDATKEDIDTAMRFGTSYPMGPIELCDYVGLDV--- 255
Query: 185 IAVDLAKAFGDRISG----GNLGIMQDLVQAGYMGRKSGXRF 298
K F + I G + +M LV G +GRK+ F
Sbjct: 256 -LQSTLKIFRETIPGDARFAPIPLMDKLVAEGKLGRKTKQGF 296
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 VGDGPGFYTTRILSTMLSEAVRLLQE-GVDPKELDNMTKQFGFPVGAATLADEVGIDV 175
VG+ P F R+L L+++ +L+ E G P ++D + FGF +G T+AD G+DV
Sbjct: 217 VGNCPAFVFNRLLGVYLNQSQKLMYEYGYLPHQIDKIITNFGFLMGPLTVADMNGLDV 274
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 43.6 bits (98), Expect = 9e-05
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 11 DGPGFYTTRILSTMLSEAVRLLQEG-VDPKELDNMTKQ-FGFPVGAATLADEVGIDVGSH 184
D PGF R+L EA R+ + G ++D K G P+G LAD +G+D
Sbjct: 196 DSPGFIVNRLLIPYFFEAARMYERGDASMTDIDEAMKLGAGHPMGPFELADYIGLDTVKF 255
Query: 185 IAVDLAKAFGDRISGGNLGIMQDLVQAGYMGRKSGXRF 298
+ A + + ++ LV G +GRK+G F
Sbjct: 256 VMDGWAAKYPEVQLFEASPLVDKLVAEGKLGRKTGDGF 293
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 VGDGPGFYTTRILSTMLSEAVRLLQE-GVDPKELDNMTKQFGFPVGAATLADEVGIDV 175
VG+ F R+L ++ +L+ E G P ++D + FGF +G T+AD G DV
Sbjct: 214 VGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFDV 271
>Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical
protein R11G10.2 protein.
Length = 576
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 68 RLLQEGVDPKELDNMTKQFG 127
RLL++G P EL+N+++ FG
Sbjct: 270 RLLRDGFMPSELENVSESFG 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,400,260
Number of Sequences: 27780
Number of extensions: 250158
Number of successful extensions: 564
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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