Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS335A12f
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   3.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   6.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 371 WSENILEDLDYADDIVLMTPTLDQMQAKLEDLR 273
           WS   +EDL  +D+  +  PT+ ++Q  L  L+
Sbjct: 93  WSTLPIEDLTKSDNEDITYPTVLEVQLNLPILK 125


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 371 WSENILEDLDYADDIVLMTPTLDQMQAKLEDLR 273
           WS   +EDL  +D+  +  PT+ ++Q  L  L+
Sbjct: 131 WSTLPIEDLTKSDNEDITYPTVLEVQLNLPILK 163


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 219 HVDSFVGVNTQASF-LRRYTEVFKFCLHLIQSWRHQHYVICIVKVFQDIF 365
           H++  +G   +    LR Y    ++ +  + + RH+ Y  C  + + DIF
Sbjct: 177 HINQNMGDKVEIGIDLREYYPSVEWDILGVPAERHKKYYPCCDEPYPDIF 226


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 92  TN*ESQGCFRAVETSLGVKC 33
           T+ E    F+A+E S+G KC
Sbjct: 159 TDDEPYASFKAMEDSVGGKC 178


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 4/11 (36%), Positives = 10/11 (90%)
 Frame = +1

Query: 181 WSFRGVVFFDI 213
           W ++G+V+F++
Sbjct: 72  WDYKGIVYFEL 82


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 4/11 (36%), Positives = 10/11 (90%)
 Frame = +1

Query: 181 WSFRGVVFFDI 213
           W ++G+V+F++
Sbjct: 194 WDYKGIVYFEL 204


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 320 MTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDM 219
           +T TLD++    + LR  A+ RG        VD+
Sbjct: 888 LTQTLDKLIRSPDTLRKIAQNRGTNPLAPDAVDL 921


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,059
Number of Sequences: 438
Number of extensions: 2676
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)