Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334H10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0602 + 19183549-19184919                                         32   0.32 
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646     31   0.74 
06_01_0025 - 244068-244177,244279-244333,244500-244527,244621-24...    29   2.3  
01_06_1372 + 36726129-36728240                                         29   2.3  
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998...    27   9.1  

>08_02_0602 + 19183549-19184919
          Length = 456

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +3

Query: 279 ATNYIAAAAPVHYASPVHYAAPVAKVITPAHKVLVSAHHEEE---YAHPKYDFAYSVADG 449
           A+  +AAA P   A  +  A     V +    +L+SA HE     YA+ + D A   ADG
Sbjct: 198 ASGSVAAALP---AGVLDDACADLDVTSSNQPLLLSAEHEVVDALYANQEADAAILHADG 254

Query: 450 HSGDNKSQHESRDG 491
           H   ++SQ E   G
Sbjct: 255 HHNQDESQREHHHG 268


>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
          Length = 378

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = +3

Query: 243 SSQTILRHDQPHATNYIAAAAPVHYASPVHYAAPVAKVITPAHKVLVSAHHEEEYAHPK 419
           SS+  +RH + H+++ +  A P+  A P+  ++P++    P   +  S HHE +  H K
Sbjct: 209 SSRIAIRHSRDHSSDCLTPA-PMPPA-PLSCSSPISIKQPPRLSIQRSQHHERDTRHAK 265


>06_01_0025 -
           244068-244177,244279-244333,244500-244527,244621-244691,
           244829-244926,245069-245186,245573-245636,245744-245808,
           245893-245928,246255-246311,246422-246691
          Length = 323

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +3

Query: 291 IAAAAPVHYASPVHYAAPVAKVITPAHKVLVSAHHEEEYAHPKYDFAYSVADG 449
           +AAA P  YA  +  AAP A +  P      S     EY H  Y F   +  G
Sbjct: 43  LAAAHPYGYAPWLANAAPAALLRRPVSTTFYSFDLLREYPHDPYAFTQGLLYG 95


>01_06_1372 + 36726129-36728240
          Length = 703

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 164 VDGYWSGGYIFGAMELWLVVTDDALRGD 81
           +DG +  GYI  A  LW  +T+D L  D
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPD 649


>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
            22999888-22999957,23000050-23000293,23000396-23000482,
            23000655-23000706,23000830-23001226,23001324-23001648,
            23001748-23001914,23002007-23002547
          Length = 1646

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 408  AHPKYDFAYSVADGHSGDNKSQHESRDG 491
            AH + D   +V DG SGD+KS H  + G
Sbjct: 988  AH-RQDSEKTVQDGPSGDDKSSHPQKGG 1014


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,087,498
Number of Sequences: 37544
Number of extensions: 155713
Number of successful extensions: 555
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)