Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334H08f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY121666-1|AAM51993.1| 1561|Drosophila melanogaster RE10888p pro... 33 0.18
AF387518-1|AAL01872.1| 1564|Drosophila melanogaster Rho-GTPase a... 33 0.18
AE014298-2594|AAN09591.1| 1561|Drosophila melanogaster CG32555-P... 33 0.18
AE014298-2593|AAF48748.2| 1561|Drosophila melanogaster CG32555-P... 33 0.18
AE014298-2592|AAF48749.2| 1561|Drosophila melanogaster CG32555-P... 33 0.18
L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein. 30 1.7
BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p pro... 30 1.7
AE013599-2841|AAM70846.1| 699|Drosophila melanogaster CG11949-P... 30 1.7
AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-P... 30 1.7
AE013599-2839|AAF57591.1| 889|Drosophila melanogaster CG11949-P... 30 1.7
AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-P... 30 1.7
AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA ... 29 3.8
>AY121666-1|AAM51993.1| 1561|Drosophila melanogaster RE10888p
protein.
Length = 1561
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 259 KYIYDILRMFILNLKLRSAKEFRKYFKKN---KLECARVCG 372
KY+YDIL + IL+LKL K + Y + ++ C CG
Sbjct: 734 KYVYDILNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCG 774
>AF387518-1|AAL01872.1| 1564|Drosophila melanogaster Rho-GTPase
activating protein p190 protein.
Length = 1564
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 259 KYIYDILRMFILNLKLRSAKEFRKYFKKN---KLECARVCG 372
KY+YDIL + IL+LKL K + Y + ++ C CG
Sbjct: 734 KYVYDILNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCG 774
>AE014298-2594|AAN09591.1| 1561|Drosophila melanogaster CG32555-PC,
isoform C protein.
Length = 1561
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 259 KYIYDILRMFILNLKLRSAKEFRKYFKKN---KLECARVCG 372
KY+YDIL + IL+LKL K + Y + ++ C CG
Sbjct: 734 KYVYDILNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCG 774
>AE014298-2593|AAF48748.2| 1561|Drosophila melanogaster CG32555-PB,
isoform B protein.
Length = 1561
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 259 KYIYDILRMFILNLKLRSAKEFRKYFKKN---KLECARVCG 372
KY+YDIL + IL+LKL K + Y + ++ C CG
Sbjct: 734 KYVYDILNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCG 774
>AE014298-2592|AAF48749.2| 1561|Drosophila melanogaster CG32555-PA,
isoform A protein.
Length = 1561
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 259 KYIYDILRMFILNLKLRSAKEFRKYFKKN---KLECARVCG 372
KY+YDIL + IL+LKL K + Y + ++ C CG
Sbjct: 734 KYVYDILNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCG 774
>L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein.
Length = 1698
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 435 LLDGEHITIEVHRKARGEDLLDRICEDLD 521
LLDG + + + RKA G D+++ IC L+
Sbjct: 38 LLDGSLLDVSIDRKAIGRDVINSICAGLN 66
>BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p
protein.
Length = 703
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 435 LLDGEHITIEVHRKARGEDLLDRICEDLD 521
LLDG + + + RKA G D+++ IC L+
Sbjct: 38 LLDGSLLDVSIDRKAIGRDVINSICAGLN 66
>AE013599-2841|AAM70846.1| 699|Drosophila melanogaster CG11949-PD,
isoform D protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 435 LLDGEHITIEVHRKARGEDLLDRICEDLD 521
LLDG + + + RKA G D+++ IC L+
Sbjct: 38 LLDGSLLDVSIDRKAIGRDVINSICAGLN 66
>AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-PA,
isoform A protein.
Length = 1698
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 435 LLDGEHITIEVHRKARGEDLLDRICEDLD 521
LLDG + + + RKA G D+++ IC L+
Sbjct: 38 LLDGSLLDVSIDRKAIGRDVINSICAGLN 66
>AE013599-2839|AAF57591.1| 889|Drosophila melanogaster CG11949-PB,
isoform B protein.
Length = 889
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 435 LLDGEHITIEVHRKARGEDLLDRICEDLD 521
LLDG + + + RKA G D+++ IC L+
Sbjct: 38 LLDGSLLDVSIDRKAIGRDVINSICAGLN 66
>AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-PC,
isoform C protein.
Length = 703
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 435 LLDGEHITIEVHRKARGEDLLDRICEDLD 521
LLDG + + + RKA G D+++ IC L+
Sbjct: 38 LLDGSLLDVSIDRKAIGRDVINSICAGLN 66
>AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA
protein.
Length = 4056
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 412 GCEECGWNSSTVNISPSKYTEKPAVKTC 495
GC++C +N VN+S K ++ A+ C
Sbjct: 3776 GCDKCNYNGKCVNVSAEKSHKEIAICKC 3803
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,578,389
Number of Sequences: 53049
Number of extensions: 323238
Number of successful extensions: 592
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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