Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334H07f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC026184-1|AAH26184.2| 490|Homo sapiens C19orf2 protein protein. 68 2e-11
BC067259-1|AAH67259.1| 494|Homo sapiens chromosome 19 open read... 67 4e-11
AB006572-1|BAA34781.1| 508|Homo sapiens RPB5 meidating protein ... 67 4e-11
AF091095-1|AAD08679.1| 458|Homo sapiens NNX3 protein. 60 6e-09
Y17394-1|CAA76761.1| 197|Homo sapiens prefoldin subunit 3 protein. 33 0.61
U96759-1|AAC23907.1| 160|Homo sapiens von Hippel-Lindau binding... 33 0.61
U56833-1|AAC50617.1| 166|Homo sapiens VHL binding protein-1 pro... 33 0.61
CR541932-1|CAG46730.1| 160|Homo sapiens VBP1 protein. 33 0.61
BT019604-1|AAV38411.1| 197|Homo sapiens von Hippel-Lindau bindi... 33 0.61
BC046094-1|AAH46094.1| 197|Homo sapiens von Hippel-Lindau bindi... 33 0.61
AL356738-8|CAI41469.1| 197|Homo sapiens von Hippel-Lindau bindi... 32 1.1
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease... 30 4.3
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. 30 4.3
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea... 30 4.3
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea... 30 4.3
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea... 30 4.3
>BC026184-1|AAH26184.2| 490|Homo sapiens C19orf2 protein protein.
Length = 490
Score = 68.1 bits (159), Expect = 2e-11
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Frame = +1
Query: 175 EKNLQFWV---NYLKELRELDLNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGAD 345
++ +Q W N LRE L+ DKL+ +VP G G+++HTNE+TV LG +
Sbjct: 43 QERIQHWKKVDNDYNALRER-LSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDN 101
Query: 346 YFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNE-NIYGTKAEEIVEI 516
+FAKCS KQA L +HR + +D +K +S++ F+ + A +IV+I
Sbjct: 102 WFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDI 159
>BC067259-1|AAH67259.1| 494|Homo sapiens chromosome 19 open reading
frame 2 protein.
Length = 494
Score = 66.9 bits (156), Expect = 4e-11
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +1
Query: 199 NYLKELRELDLNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAE 378
N LRE L+ DKL+ +VP G G+++HTNE+TV LG ++FAKCS KQA
Sbjct: 16 NDYNALRER-LSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAV 74
Query: 379 ILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNE-NIYGTKAEEIVEI 516
L +HR + +D +K +S++ F+ + A +IV+I
Sbjct: 75 GLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDI 121
>AB006572-1|BAA34781.1| 508|Homo sapiens RPB5 meidating protein
protein.
Length = 508
Score = 66.9 bits (156), Expect = 4e-11
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +1
Query: 199 NYLKELRELDLNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAE 378
N LRE L+ DKL+ +VP G G+++HTNE+TV LG ++FAKCS KQA
Sbjct: 30 NDYNALRER-LSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAV 88
Query: 379 ILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNE-NIYGTKAEEIVEI 516
L +HR + +D +K +S++ F+ + A +IV+I
Sbjct: 89 GLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDI 135
>AF091095-1|AAD08679.1| 458|Homo sapiens NNX3 protein.
Length = 458
Score = 59.7 bits (138), Expect = 6e-09
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 265 LVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYD 444
+VP G G+++HTNE+TV LG ++FAKCS KQA L +HR + +D +K
Sbjct: 1 MVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMK 60
Query: 445 YLKSQIAFSNE-NIYGTKAEEIVEI 516
+S++ F+ + A +IV+I
Sbjct: 61 NFESRVEFTEDLQKMSDAAGDIVDI 85
>Y17394-1|CAA76761.1| 197|Homo sapiens prefoldin subunit 3 protein.
Length = 197
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 67 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCL 125
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 126 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 176
>U96759-1|AAC23907.1| 160|Homo sapiens von Hippel-Lindau binding
protein protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 30 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCL 88
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 89 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 139
>U56833-1|AAC50617.1| 166|Homo sapiens VHL binding protein-1
protein.
Length = 166
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 36 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCL 94
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 95 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 145
>CR541932-1|CAG46730.1| 160|Homo sapiens VBP1 protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 30 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCL 88
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 89 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 139
>BT019604-1|AAV38411.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 67 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCL 125
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 126 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 176
>BC046094-1|AAH46094.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 33.1 bits (72), Expect = 0.61
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 67 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKVCL 125
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 126 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 176
>AL356738-8|CAI41469.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 32.3 bits (70), Expect = 1.1
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 LAENEKNLQFWVNYLKELRELDLNVFADKL----TVPTLVPIGNRILFRGEIIHTNEITV 330
LA+ ++ L+ + +K+ E+ L K ++ T + + + + + T+++ +
Sbjct: 67 LAQKKRRLKGQIPEIKQTLEI-LKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKMCL 125
Query: 331 SLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSNENI 483
LGA+ + + +A+ L + + A +D E++ D+L+ Q + N+
Sbjct: 126 WLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNM 176
>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 465 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 358
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
Length = 2255
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 465 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 358
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2092 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2127
>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 465 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 358
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 465 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 358
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
and receptor for egg jelly related protein protein.
Length = 2253
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 465 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 358
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,759,576
Number of Sequences: 237096
Number of extensions: 1195042
Number of successful extensions: 2096
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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