Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334H06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for ... 191 1e-48
Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for ... 190 3e-48
X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide dism... 190 3e-48
X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for ... 190 3e-48
X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide dism... 190 3e-48
M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human manganese... 190 3e-48
BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,... 190 3e-48
BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,... 190 3e-48
AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing su... 190 3e-48
AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,... 190 3e-48
AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,... 190 3e-48
X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for ... 188 1e-47
AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing su... 184 2e-46
AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing su... 184 2e-46
DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing su... 184 2e-46
AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing su... 184 2e-46
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu... 31 2.4
BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein. 31 2.4
AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein. 31 2.4
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T... 31 2.4
BC150246-1|AAI50247.1| 1563|Homo sapiens WDFY3 protein protein. 30 4.3
BC148294-1|AAI48295.1| 281|Homo sapiens WD repeat and FYVE doma... 30 4.3
BC119633-1|AAI19634.1| 281|Homo sapiens WD repeat and FYVE doma... 30 4.3
BC065502-1|AAH65502.1| 778|Homo sapiens WDFY3 protein protein. 30 4.3
BC015214-1|AAH15214.2| 437|Homo sapiens WDFY3 protein protein. 30 4.3
BC013377-1|AAH13377.1| 281|Homo sapiens WD repeat and FYVE doma... 30 4.3
AK055806-1|BAB71020.1| 722|Homo sapiens protein ( Homo sapiens ... 30 4.3
AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein. 30 4.3
AF411979-1|AAL04163.1| 420|Homo sapiens WD40- and FYVE-domain c... 30 4.3
AB023210-1|BAA76837.2| 1556|Homo sapiens KIAA0993 protein protein. 30 4.3
Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein. 30 5.7
AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter pro... 30 5.7
AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette tr... 30 5.7
AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein p... 30 5.7
U88667-1|AAC51144.1| 2273|Homo sapiens ATP-binding cassette tran... 29 7.5
>Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for Mn
superoxide dismutase (EC 1.15.1.1.). ).
Length = 222
Score = 191 bits (465), Expect = 1e-48
Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NKQ
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKQRG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for
manganese-containing superoxide dismutase. ).
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide
dismutase (MnSOD) protein.
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for
manganese containing superoxide dismutase (EC
1.15.1.1). ).
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide
dismutase protein.
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human
manganese-containing superoxide dismutase mRNA, complete
cds. ).
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 94 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 153
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 154 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 213
>AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 190 bits (462), Expect = 3e-48
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for
manganese superoxide dismutase (EC 1.15.1.1). ).
Length = 222
Score = 188 bits (458), Expect = 1e-47
Identities = 81/120 (67%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A++ DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 98 HSIFWTNLSPNGGGEPKGELLEAIKLDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 157
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRY 163
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++++RY
Sbjct: 158 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
>AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 210
Score = 184 bits (448), Expect = 2e-46
Identities = 79/117 (67%), Positives = 96/117 (82%), Gaps = 1/117 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 94 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 153
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDIS 172
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW +++
Sbjct: 154 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVT 210
>AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 184 bits (448), Expect = 2e-46
Identities = 79/117 (67%), Positives = 96/117 (82%), Gaps = 1/117 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 97 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 156
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDIS 172
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW +++
Sbjct: 157 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVT 213
>DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 212
Score = 184 bits (447), Expect = 2e-46
Identities = 79/116 (68%), Positives = 95/116 (81%), Gaps = 1/116 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 97 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 156
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDI 175
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++
Sbjct: 157 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENV 212
>AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 209
Score = 184 bits (447), Expect = 2e-46
Identities = 79/116 (68%), Positives = 95/116 (81%), Gaps = 1/116 (0%)
Frame = -3
Query: 519 HSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMK 343
HSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGSGWGWLG+NK+
Sbjct: 94 HSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERG 153
Query: 342 KLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDI 175
LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI++V NW ++
Sbjct: 154 HLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENV 209
>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
protein.
Length = 2109
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 408 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 307
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1799 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1832
>BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein.
Length = 978
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 408 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 307
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 693 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 726
>AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein.
Length = 279
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 408 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 307
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 100 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 133
>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
(TFIIIC) alpha chain, partial protein.
Length = 1857
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 408 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 307
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1547 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1580
>BC150246-1|AAI50247.1| 1563|Homo sapiens WDFY3 protein protein.
Length = 1563
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 1475 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 1531
>BC148294-1|AAI48295.1| 281|Homo sapiens WD repeat and FYVE domain
containing 3 protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 193 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 249
>BC119633-1|AAI19634.1| 281|Homo sapiens WD repeat and FYVE domain
containing 3 protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 193 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 249
>BC065502-1|AAH65502.1| 778|Homo sapiens WDFY3 protein protein.
Length = 778
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 690 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 746
>BC015214-1|AAH15214.2| 437|Homo sapiens WDFY3 protein protein.
Length = 437
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 349 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 405
>BC013377-1|AAH13377.1| 281|Homo sapiens WD repeat and FYVE domain
containing 3 protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 193 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 249
>AK055806-1|BAB71020.1| 722|Homo sapiens protein ( Homo sapiens
cDNA FLJ31244 fis, clone KIDNE2005042, moderately
similar to LYSOSOMAL TRAFFICKING REGULATOR. ).
Length = 722
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 634 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 690
>AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein.
Length = 3526
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 3438 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 3494
>AF411979-1|AAL04163.1| 420|Homo sapiens WD40- and FYVE-domain
containing protein 3 protein.
Length = 420
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 332 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 388
>AB023210-1|BAA76837.2| 1556|Homo sapiens KIAA0993 protein protein.
Length = 1556
Score = 30.3 bits (65), Expect = 4.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 331 SYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQER--SCRLRESYFRCSQLE*YISEI 164
S +PG SA HW+ + C G V S+ ER CR F C + + SEI
Sbjct: 1468 SVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCGQLF-CQKCSRFQSEI 1524
>Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein.
Length = 2273
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 271 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 450
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 451 N 453
+
Sbjct: 1116 S 1116
>AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter protein.
Length = 2273
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 271 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 450
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 451 N 453
+
Sbjct: 1116 S 1116
>AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 271 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 450
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 451 N 453
+
Sbjct: 1116 S 1116
>AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein
protein.
Length = 2303
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 271 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 450
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1086 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1145
Query: 451 N 453
+
Sbjct: 1146 S 1146
>U88667-1|AAC51144.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 271 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL 420
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,381,227
Number of Sequences: 237096
Number of extensions: 1868095
Number of successful extensions: 3833
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3816
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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