Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334H06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 193 7e-50
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 193 7e-50
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 193 7e-50
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 177 3e-45
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 177 3e-45
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 177 3e-45
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 28 3.5
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 27 6.2
Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 193 bits (470), Expect = 7e-50
Identities = 84/122 (68%), Positives = 102/122 (83%)
Frame = -3
Query: 519 HSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKK 340
HSIFW NL+ +GG+PS L A++ DFGS DNL+ QLS ++VAVQGSGWGWLGY + K
Sbjct: 98 HSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKI 157
Query: 339 LQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYE 160
L++ATC NQDPL+ATTGLVPLFGIDVWEHAYYLQYKNVR DYV AI+ +ANW ++S+R+
Sbjct: 158 LKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFA 217
Query: 159 KA 154
KA
Sbjct: 218 KA 219
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 193 bits (470), Expect = 7e-50
Identities = 84/122 (68%), Positives = 102/122 (83%)
Frame = -3
Query: 519 HSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKK 340
HSIFW NL+ +GG+PS L A++ DFGS DNL+ QLS ++VAVQGSGWGWLGY + K
Sbjct: 98 HSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKI 157
Query: 339 LQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYE 160
L++ATC NQDPL+ATTGLVPLFGIDVWEHAYYLQYKNVR DYV AI+ +ANW ++S+R+
Sbjct: 158 LKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFA 217
Query: 159 KA 154
KA
Sbjct: 218 KA 219
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 193 bits (470), Expect = 7e-50
Identities = 84/122 (68%), Positives = 102/122 (83%)
Frame = -3
Query: 519 HSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKK 340
HSIFW NL+ +GG+PS L A++ DFGS DNL+ QLS ++VAVQGSGWGWLGY + K
Sbjct: 98 HSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKI 157
Query: 339 LQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYE 160
L++ATC NQDPL+ATTGLVPLFGIDVWEHAYYLQYKNVR DYV AI+ +ANW ++S+R+
Sbjct: 158 LKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFA 217
Query: 159 KA 154
KA
Sbjct: 218 KA 219
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 177 bits (432), Expect = 3e-45
Identities = 79/122 (64%), Positives = 98/122 (80%)
Frame = -3
Query: 519 HSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKK 340
HSIFW NL+ +GG+PS L +++DFGS DNL+ +LS ++AVQGSGWGWLGY K+ K
Sbjct: 98 HSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKI 157
Query: 339 LQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYE 160
L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYKNVR DYV AI+ +ANW +IS+R+
Sbjct: 158 LKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFA 214
Query: 159 KA 154
A
Sbjct: 215 NA 216
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 177 bits (432), Expect = 3e-45
Identities = 79/122 (64%), Positives = 98/122 (80%)
Frame = -3
Query: 519 HSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKK 340
HSIFW NL+ +GG+PS L +++DFGS DNL+ +LS ++AVQGSGWGWLGY K+ K
Sbjct: 98 HSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKI 157
Query: 339 LQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYE 160
L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYKNVR DYV AI+ +ANW +IS+R+
Sbjct: 158 LKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFA 214
Query: 159 KA 154
A
Sbjct: 215 NA 216
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 177 bits (432), Expect = 3e-45
Identities = 79/122 (64%), Positives = 98/122 (80%)
Frame = -3
Query: 519 HSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGSGWGWLGYNKQMKK 340
HSIFW NL+ +GG+PS L +++DFGS DNL+ +LS ++AVQGSGWGWLGY K+ K
Sbjct: 98 HSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKI 157
Query: 339 LQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIFDVANWNDISQRYE 160
L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYKNVR DYV AI+ +ANW +IS+R+
Sbjct: 158 LKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISERFA 214
Query: 159 KA 154
A
Sbjct: 215 NA 216
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -2
Query: 418 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIGPALRNRCMGA 254
+ T DS C S G L Q+ + +ANS++ G+S+ WIG CM +
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 415 STVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIG 284
+T +C S G L T+ +A+S E GS+ G WIG
Sbjct: 45 NTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 321 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 214
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 321 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 214
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 494 HQMVASLLMFSPKPLRKTLDPGIT*RINCRQLL 396
H++V +L F P PL+++++P T IN L+
Sbjct: 68 HKIVETLNNFKPSPLQRSIEPPKTPSINKPSLI 100
>Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical
protein F23B2.3 protein.
Length = 626
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 333 FAISSFVCCSQANPSLSPV 389
F SF CCS A+P+L+PV
Sbjct: 230 FQGESFDCCSLASPTLTPV 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,573,615
Number of Sequences: 27780
Number of extensions: 269875
Number of successful extensions: 714
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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