Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334G12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   1.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   1.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.4  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 12  WFYLVNLPRPFPLRKARHRLSGIHE 86
           W Y +N PR     + R +  GIHE
Sbjct: 334 WIYAINHPRYRQELQKRCKWMGIHE 358


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 12  WFYLVNLPRPFPLRKARHRLSGIHE 86
           W Y +N PR     + R +  GIHE
Sbjct: 334 WIYAINHPRYRQELQKRCKWMGIHE 358


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 DKQKGQITIIIRTI*LGVALFNLEIKTVILNISGL 290
           DKQ+  +T++++ I      F  ++KT  LNIS +
Sbjct: 759 DKQETGVTLVVQEISSDGLKFAFDVKTT-LNISDI 792


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 459 ANWVPGPPSRHLILNAL 409
           A  +PGPP+  LI NAL
Sbjct: 41  AEKIPGPPALPLIGNAL 57


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 513 SHDVVKRRPVNCNTTHYRANWVPGP 439
           S +  K++P +C+T  YR   V  P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,512
Number of Sequences: 438
Number of extensions: 3195
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)