Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334F12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074500-1|BAC11025.1| 401|Homo sapiens protein ( Homo sapiens ... 33 0.61
AF378754-1|AAL11991.1| 2063|Homo sapiens tumor endothelial marke... 33 0.61
BC104912-1|AAI04913.1| 1236|Homo sapiens PPFIA2 protein protein. 31 2.4
AF034799-1|AAC26100.1| 1257|Homo sapiens liprin-alpha2 protein. 31 2.4
AB210009-1|BAE06091.1| 1258|Homo sapiens PPFIA2 variant protein ... 31 2.4
AF115509-1|AAD41257.1| 721|Homo sapiens LRR FLI-I interacting p... 30 4.3
X15786-1|CAA33787.1| 899|Homo sapiens retII protein. 29 7.5
BC023021-1|AAH23021.1| 731|Homo sapiens golgi autoantigen, golg... 29 7.5
AY644768-1|AAV85456.1| 731|Homo sapiens cell proliferation-indu... 29 7.5
AJ132949-1|CAB36967.1| 585|Homo sapiens rfg5 protein protein. 29 7.5
AF085199-1|AAD09753.1| 731|Homo sapiens golgin-84 protein. 29 7.5
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 9.9
AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein. 29 9.9
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 9.9
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 9.9
AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein. 29 9.9
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 29 9.9
AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein. 29 9.9
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 29 9.9
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 29 9.9
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 29 9.9
>AK074500-1|BAC11025.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ90019 fis, clone HEMBA1000745, weakly similar to
COLLAGEN ALPHA 1(I) CHAIN. ).
Length = 401
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 1 QSCWPIHCKPSAIPIEAPVTCGRAHRPLDRRESA*GAYEGGHSYY 135
++C+P+ SA P+ P T GR RP ++E A +G HS++
Sbjct: 174 RTCFPLAGLRSARPLTGPETEGRLRRPQQQQERAQRPADGLHSWH 218
>AF378754-1|AAL11991.1| 2063|Homo sapiens tumor endothelial marker 4
protein.
Length = 2063
Score = 33.1 bits (72), Expect = 0.61
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 1 QSCWPIHCKPSAIPIEAPVTCGRAHRPLDRRESA*GAYEGGHSYY 135
++C+P+ SA P+ P T GR RP ++E A +G HS++
Sbjct: 174 RTCFPLAGLRSARPLTGPETEGRLRRPQQQQERAQRPADGLHSWH 218
>BC104912-1|AAI04913.1| 1236|Homo sapiens PPFIA2 protein protein.
Length = 1236
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 378 FLHRFKLSDDIRELLRAKNASIRAYDRYPTAENR--IRMRALQRDVKSRIAKVRDARWSD 205
F H L + +RE LR + A + A N+ + +R ++ ++A + S+
Sbjct: 181 FEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESE 240
Query: 204 FLEGLAPSQR 175
LEG+ P Q+
Sbjct: 241 HLEGMEPGQK 250
>AF034799-1|AAC26100.1| 1257|Homo sapiens liprin-alpha2 protein.
Length = 1257
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 378 FLHRFKLSDDIRELLRAKNASIRAYDRYPTAENR--IRMRALQRDVKSRIAKVRDARWSD 205
F H L + +RE LR + A + A N+ + +R ++ ++A + S+
Sbjct: 181 FEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESE 240
Query: 204 FLEGLAPSQR 175
LEG+ P Q+
Sbjct: 241 HLEGMEPGQK 250
>AB210009-1|BAE06091.1| 1258|Homo sapiens PPFIA2 variant protein
protein.
Length = 1258
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 378 FLHRFKLSDDIRELLRAKNASIRAYDRYPTAENR--IRMRALQRDVKSRIAKVRDARWSD 205
F H L + +RE LR + A + A N+ + +R ++ ++A + S+
Sbjct: 192 FEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESE 251
Query: 204 FLEGLAPSQR 175
LEG+ P Q+
Sbjct: 252 HLEGMEPGQK 261
>AF115509-1|AAD41257.1| 721|Homo sapiens LRR FLI-I interacting
protein 2 protein.
Length = 721
Score = 30.3 bits (65), Expect = 4.3
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -3
Query: 369 RFKLSDD-IRELLRAKNASIRAYDRYPTAENR-IRMRALQRDVKSRIAKVRDARWSDFLE 196
RF D+ + + R A + A R AE R IRMR L+R K D +W +
Sbjct: 16 RFSAEDEALSNIAREAEARLAA-KRAARAEARDIRMRELERQQKEYSLHSFDRKWGQIQK 74
Query: 195 GLAPSQRSYY 166
L S+R+ Y
Sbjct: 75 WLEDSERARY 84
>X15786-1|CAA33787.1| 899|Homo sapiens retII protein.
Length = 899
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -3
Query: 486 PDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRA 307
PD TP+P D ++ ++ + + L R+ Q + ++ + S + +E L A +
Sbjct: 209 PDHTPTPNDDGKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEK 268
Query: 306 YDRYPTAENRIR--MRALQRDVKSRIA 232
++ + +R+ +RA D+ +A
Sbjct: 269 WNADHSKSDRMTRGLRAQVDDLTEAVA 295
>BC023021-1|AAH23021.1| 731|Homo sapiens golgi autoantigen, golgin
subfamily a, 5 protein.
Length = 731
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -3
Query: 486 PDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRA 307
PD TP+P D ++ ++ + + L R+ Q + ++ + S + +E L A +
Sbjct: 209 PDHTPTPNDDGKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEK 268
Query: 306 YDRYPTAENRIR--MRALQRDVKSRIA 232
++ + +R+ +RA D+ +A
Sbjct: 269 WNADHSKSDRMTRGLRAQVDDLTEAVA 295
>AY644768-1|AAV85456.1| 731|Homo sapiens cell
proliferation-inducing gene 31 protein.
Length = 731
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -3
Query: 486 PDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRA 307
PD TP+P D ++ ++ + + L R+ Q + ++ + S + +E L A +
Sbjct: 209 PDHTPTPNDDGKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEK 268
Query: 306 YDRYPTAENRIR--MRALQRDVKSRIA 232
++ + +R+ +RA D+ +A
Sbjct: 269 WNADHSKSDRMTRGLRAQVDDLTEAVA 295
>AJ132949-1|CAB36967.1| 585|Homo sapiens rfg5 protein protein.
Length = 585
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -3
Query: 486 PDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRA 307
PD TP+P D ++ ++ + + L R+ Q + ++ + S + +E L A +
Sbjct: 209 PDHTPTPNDDGKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEK 268
Query: 306 YDRYPTAENRIR--MRALQRDVKSRIA 232
++ + +R+ +RA D+ +A
Sbjct: 269 WNADHSKSDRMTRGLRAQVDDLTEAVA 295
>AF085199-1|AAD09753.1| 731|Homo sapiens golgin-84 protein.
Length = 731
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -3
Query: 486 PDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRA 307
PD TP+P D ++ ++ + + L R+ Q + ++ + S + +E L A +
Sbjct: 209 PDHTPTPNDDGKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEK 268
Query: 306 YDRYPTAENRIR--MRALQRDVKSRIA 232
++ + +R+ +RA D+ +A
Sbjct: 269 WNADHSKSDRMTRGLRAQVDDLTEAVA 295
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 131 PQQDMSQEGYGTRSQPPLAPGKPNHED 157
>AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 49 PQQDMSQEGYGTRSQPPLAPGKPNHED 75
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 131 PQQDMSQEGYGTRSQPPLAPGKPNHED 157
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 131 PQQDMSQEGYGTRSQPPLAPGKPNHED 157
>AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 49 PQQDMSQEGYGTRSQPPLAPGKPNHED 75
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 131 PQQDMSQEGYGTRSQPPLAPGKPNHED 157
>AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 49 PQQDMSQEGYGTRSQPPLAPGKPNHED 75
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA2 protein.
Length = 2165
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 556 PQQDMSQEGYGTRSQPPLAPGKPNHED 582
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 131 PQQDMSQEGYGTRSQPPLAPGKPNHED 157
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 166 PLSSYSQIGYGSNYAPPRRPLRPTHGD 86
P SQ GYG+ PP P +P H D
Sbjct: 348 PQQDMSQEGYGTRSQPPLAPGKPNHED 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,549,784
Number of Sequences: 237096
Number of extensions: 1593865
Number of successful extensions: 3881
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3881
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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