Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334F12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3184|AAF53862.1|   73|Drosophila melanogaster CG12508-P...    29   5.1  
BT021962-1|AAX94783.1|  901|Drosophila melanogaster LD03464p pro...    28   8.8  
AE013599-1446|AAM68665.1|  837|Drosophila melanogaster CG8841-PC...    28   8.8  
AE013599-1445|AAM68664.1|  837|Drosophila melanogaster CG8841-PB...    28   8.8  
AE013599-1444|AAF58533.1|  837|Drosophila melanogaster CG8841-PA...    28   8.8  

>AE014134-3184|AAF53862.1|   73|Drosophila melanogaster CG12508-PA
           protein.
          Length = 73

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = -2

Query: 319 LDTRLRQVSYRGKSYSNACPTTRRKVSHRQSPRCQMV*FLRRTRALPKVLLPLSS 155
           ++ R R+ S    + ++A  +T   +S  Q P+     F +R+  LP++L+P  S
Sbjct: 1   MEPRPRRESAEPMTSTSAATSTSTSISATQEPQGSRHGFPKRSLTLPRILVPRQS 55


>BT021962-1|AAX94783.1|  901|Drosophila melanogaster LD03464p
           protein.
          Length = 901

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = -3

Query: 222 DARWSDFLEGLAPSQRSYYRLARTLKSDT--VVTMPPLVGPSGRLTAIEWTMSTSARDGC 49
           D +W DF     PSQ     LA++L + T  ++  P     + R    E     +  D C
Sbjct: 175 DEKWRDFFWSSLPSQDKTMPLAQSLLNATCDLLFCPDFTVTATRRAGPEKAEELANIDSC 234

Query: 48  --LYRNGTGFAMYRP 10
             ++  G GFA   P
Sbjct: 235 EYIWEAGVGFAQSPP 249


>AE013599-1446|AAM68665.1|  837|Drosophila melanogaster CG8841-PC,
           isoform C protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = -3

Query: 222 DARWSDFLEGLAPSQRSYYRLARTLKSDT--VVTMPPLVGPSGRLTAIEWTMSTSARDGC 49
           D +W DF     PSQ     LA++L + T  ++  P     + R    E     +  D C
Sbjct: 111 DEKWRDFFWSSLPSQDKTMPLAQSLLNATCDLLFCPDFTVTATRRAGPEKAEELANIDSC 170

Query: 48  --LYRNGTGFAMYRP 10
             ++  G GFA   P
Sbjct: 171 EYIWEAGVGFAQSPP 185


>AE013599-1445|AAM68664.1|  837|Drosophila melanogaster CG8841-PB,
           isoform B protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = -3

Query: 222 DARWSDFLEGLAPSQRSYYRLARTLKSDT--VVTMPPLVGPSGRLTAIEWTMSTSARDGC 49
           D +W DF     PSQ     LA++L + T  ++  P     + R    E     +  D C
Sbjct: 111 DEKWRDFFWSSLPSQDKTMPLAQSLLNATCDLLFCPDFTVTATRRAGPEKAEELANIDSC 170

Query: 48  --LYRNGTGFAMYRP 10
             ++  G GFA   P
Sbjct: 171 EYIWEAGVGFAQSPP 185


>AE013599-1444|AAF58533.1|  837|Drosophila melanogaster CG8841-PA,
           isoform A protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = -3

Query: 222 DARWSDFLEGLAPSQRSYYRLARTLKSDT--VVTMPPLVGPSGRLTAIEWTMSTSARDGC 49
           D +W DF     PSQ     LA++L + T  ++  P     + R    E     +  D C
Sbjct: 111 DEKWRDFFWSSLPSQDKTMPLAQSLLNATCDLLFCPDFTVTATRRAGPEKAEELANIDSC 170

Query: 48  --LYRNGTGFAMYRP 10
             ++  G GFA   P
Sbjct: 171 EYIWEAGVGFAQSPP 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,815,356
Number of Sequences: 53049
Number of extensions: 504776
Number of successful extensions: 1193
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)