Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334F07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010038-1|AAQ22507.1|  998|Drosophila melanogaster LD44321p pro...    28   6.7  
BT001507-1|AAN71262.1|  500|Drosophila melanogaster LD38891p pro...    28   6.7  
AE014296-689|AAF47790.2| 1008|Drosophila melanogaster CG32264-PD...    28   6.7  

>BT010038-1|AAQ22507.1|  998|Drosophila melanogaster LD44321p
           protein.
          Length = 998

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 353 KYQLISFPLFSLSDLSHLCAGRHRRGQADTIERTIGGGTCSGNRNQLSI 499
           K QLI+  L SLSD+ H    + ++ QA      I GG C+  +N  +I
Sbjct: 231 KRQLIASSL-SLSDILHSSNAQQQQQQAAKDGLAINGGQCAKKQNGAAI 278


>BT001507-1|AAN71262.1|  500|Drosophila melanogaster LD38891p
           protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 353 KYQLISFPLFSLSDLSHLCAGRHRRGQADTIERTIGGGTCSGNRNQLSI 499
           K QLI+  L SLSD+ H    + ++ QA      I GG C+  +N  +I
Sbjct: 231 KRQLIASSL-SLSDILHSSNAQQQQQQAAKDGLAINGGQCAKKQNGAAI 278


>AE014296-689|AAF47790.2| 1008|Drosophila melanogaster CG32264-PD,
           isoform D protein.
          Length = 1008

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 353 KYQLISFPLFSLSDLSHLCAGRHRRGQADTIERTIGGGTCSGNRNQLSI 499
           K QLI+  L SLSD+ H    + ++ QA      I GG C+  +N  +I
Sbjct: 231 KRQLIASSL-SLSDILHSSNAQQQQQQAAKDGLAINGGQCAKKQNGAAI 278


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,420,519
Number of Sequences: 53049
Number of extensions: 295273
Number of successful extensions: 562
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)