Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334F04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 115 2e-26
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 54 7e-08
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 52 2e-07
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 51 6e-07
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 49 2e-06
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 46 2e-05
10_08_0620 - 19321612-19323237 45 3e-05
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 45 3e-05
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 44 6e-05
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 42 2e-04
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 42 3e-04
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 38 0.005
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 34 0.080
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 34 0.080
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 33 0.11
01_05_0681 - 24242485-24242560,24242721-24242785,24242874-242430... 29 2.3
04_04_0130 + 22969710-22969884,22970019-22970328,22970456-22970996 28 5.2
12_01_0265 + 1932529-1932545,1932578-1932785,1933254-1933333,193... 27 6.9
05_03_0573 - 15635338-15635502,15637573-15637632,15637776-15638033 27 6.9
06_03_0793 + 24662506-24663512,24664470-24664787,24664996-246653... 27 9.1
04_04_1341 - 32768785-32768847,32770469-32770582,32770809-327708... 27 9.1
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 115 bits (277), Expect = 2e-26
Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = -2
Query: 520 EIKANTELL-KYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLN 344
E+ A L+ K TVKG+A+LG++A+A+ALLVIPKTLA NSG D QD IV LQ E
Sbjct: 434 EVAAKKHLIDNVKKTVKGRAQLGVEAFADALLVIPKTLAENSGLDTQDVIVSLQNEHD-R 492
Query: 343 PEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 173
+GL+ +GE P GI DNY VK+QI+NS +IAS LLLVDE++RAG + K
Sbjct: 493 GLVVGLNHHSGEPIDPQMEGIFDNYSVKRQIINSGPIIASQLLLVDEVIRAGRNMRK 549
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 54.0 bits (124), Expect = 7e-08
Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKL-QEESRLN 344
+++ + L ++ T+ GK++ + ++A+AL VIP+ L N+G+DA D + KL Q+ +
Sbjct: 416 DMEISKYLRQHARTIAGKSQFFVNSFAKALEVIPRQLCDNAGFDATDVLNKLRQKHASGE 475
Query: 343 PEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 194
G+D++TG + + +VK +N+ + A +L VDE ++
Sbjct: 476 GANFGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVK 525
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/92 (34%), Positives = 48/92 (52%)
Frame = -2
Query: 472 GKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFKPT 293
GK I A++ AL IP +A N+G D+ + I +L+ E G+D+ TG
Sbjct: 423 GKKSHAIDAFSRALQAIPTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVGDMQ 482
Query: 292 DLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
GI + + VK+ IL S + A +L VDEI+
Sbjct: 483 KRGISEAFKVKQAILLSATEAAEMILRVDEII 514
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/104 (27%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Frame = -2
Query: 481 TVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ--------EESRLNPEPIGL 326
T+ + +L I +AE+LL+IPK L+VN+ DA + + KL+ + + + +GL
Sbjct: 414 TLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGL 473
Query: 325 DLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 194
DLS G + G+++ + K +I+ + A +L +D++++
Sbjct: 474 DLSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIK 517
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/110 (29%), Positives = 52/110 (47%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI+ L ++ G + I +AE+ ++P+TLA N+G A + I L E
Sbjct: 414 EIELARRLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGN 473
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 191
+G+DL G + + I D Y+ K L + A +L VD+I+ A
Sbjct: 474 TKVGIDLEEGGCKDVSIMKIWDLYVTKLFALKYSADAACTVLRVDQIIMA 523
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
E+ + L + +V+G + +A A A IP+TL N G + T+ +LQ +
Sbjct: 417 ELTVSATLKQKSSSVEGVEKWPYEAAALAFEAIPRTLLQNCGLNVIRTMTQLQGKHANGE 476
Query: 340 EP-IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
+G+D S+G+ + I D+Y VK Q + A LL +D+I+
Sbjct: 477 NAWVGIDGSSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIV 525
>10_08_0620 - 19321612-19323237
Length = 541
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/108 (23%), Positives = 51/108 (47%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI+ + +L + ++G ++ +AEAL VIP TLA N+G D T+ +L+
Sbjct: 431 EIEMSMQLAAWAKELRGMESYCVREFAEALEVIPYTLAENAGLDPISTVTELRNRHAKGE 490
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
+ G+++ G + ++ +V + +L +D+I+
Sbjct: 491 KNAGINVRKGRITNILEENVVQPLLVSTSAVTLACECVRMILKIDDIV 538
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Frame = -2
Query: 472 GKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFK-- 299
GK I+A++ AL IP +A N+G D+ D I +L+ E G+D+ +G +
Sbjct: 400 GKKSHAIEAFSRALQSIPTIIADNAGLDSADLISQLRAEHHKEQSTAGIDVISGGGLELI 459
Query: 298 ---------PTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
LGI +++ K+ +L S + A +L VDEI+
Sbjct: 460 LRLLPQVGDMEKLGISESFKAKQAVLMSATEAAEMILRVDEIV 502
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
E+ + L + +V+G + +A A A IP+TLA N G + + +LQ + L+
Sbjct: 417 ELTVSAALKQKSSSVEGVEKWPYEAAALAFEAIPRTLAQNCGLNVIRIMTQLQGKDMLHA 476
Query: 340 EP----IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
+G+D +G+ + I D+Y VK Q + A LL +D+I+
Sbjct: 477 NGENAWVGIDGRSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIV 528
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTI--VKLQEESRL 347
EI + + D G + I+++A+AL IP LA NSG DT+ VK Q+
Sbjct: 422 EISCSVAVEAAADRYPGVEQYAIRSFADALDAIPLALAENSGLSPIDTLTAVKSQQVKES 481
Query: 346 NPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
NP G+D + + + + I K+Q + + + +L +D+++
Sbjct: 482 NPH-CGIDCNDVGTNHMKEQNVFETLIGKQQQILLATQVVKMILKIDDVI 530
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/108 (22%), Positives = 51/108 (47%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI+ + +L + ++G I+ +AEAL VIP TLA N+G + + +L+
Sbjct: 440 EIEMSMQLAAWAKELQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAKGE 499
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
+ G+++ G+ + ++ +V + +L +D+I+
Sbjct: 500 KNAGINVRKGQITNILEENVVQPLLVSTSAITLACECVRMILKIDDIV 547
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 37.9 bits (84), Expect = 0.005
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = -2
Query: 481 TVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAF 302
T ++G+Q AL T+A N+G D I KL E+ LN +G D + GE
Sbjct: 566 TANEDEKIGVQIIKNALKAPLMTIAANAGIDGGVVIGKLIEQDNLN---MGYDAARGEYV 622
Query: 301 KPTDLGILDNYIVKKQILNSCSVIA 227
GI+D V + L S ++
Sbjct: 623 DMIKAGIIDPVKVIRTALQDASSVS 647
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 33.9 bits (74), Expect = 0.080
Identities = 27/105 (25%), Positives = 47/105 (44%)
Frame = -2
Query: 511 ANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPI 332
A+ EL K T ++G+Q AL T+A N+G + + KL E+ + +
Sbjct: 472 ASKELDKLP-TANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTD---L 527
Query: 331 GLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
G D + GE GI+D V + L + ++S + + I+
Sbjct: 528 GYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTESII 572
>09_06_0292 + 22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 33.9 bits (74), Expect = 0.080
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -2
Query: 463 RLGIQAYAEALLVIPKTLAVNSGYDAQDTIVK-LQEESRLNPEPIGLDLSTGEAFKPTDL 287
++G+ +ALLV T+A N+G D + K L E R +G + T + D
Sbjct: 1014 KIGVNIVGKALLVPAMTIARNAGADGPAVVEKLLASEWR-----VGYNAMTDKFEDLVDA 1068
Query: 286 GILDNYIVKKQILNSCSVIASNLLLVDEIM 197
G++D V + +L + + IA +L+ +M
Sbjct: 1069 GVVDPCRVARCVLQNSASIAGLILMTQAMM 1098
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = -2
Query: 463 RLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFKPTDLG 284
++G+Q AL T+A N+G + I KL E+ + +G D + GE G
Sbjct: 506 KIGVQIIQNALKTPVHTIASNAGVEGSVIIGKLLEQDNTD---LGYDAAKGEYVDMVKSG 562
Query: 283 ILDNYIVKKQILNSCSVIASNLLLVDEIM 197
I+D V + L + ++S + + I+
Sbjct: 563 IIDPLKVIRTALVDAASVSSLMTTTESII 591
>01_05_0681 -
24242485-24242560,24242721-24242785,24242874-24243029,
24243073-24243121,24243291-24243366,24243456-24243666,
24244038-24244160,24244245-24244363,24244439-24244532,
24245123-24245233,24245336-24245392
Length = 378
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 493 KYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPI 332
+Y VKG L A + A LV+P L ++ + D ++KLQ R++ E +
Sbjct: 264 RYYRYVKGTGSL--LATSNASLVLPLNLNIHDSFSFYDYLLKLQNLKRISKEDL 315
>04_04_0130 + 22969710-22969884,22970019-22970328,22970456-22970996
Length = 341
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 331 GLDLSTGEAFKPTDLGILDNYIVKK 257
G+DL G F PTD ++ +Y+ KK
Sbjct: 9 GMDLPPGFRFHPTDEELITHYLAKK 33
>12_01_0265 +
1932529-1932545,1932578-1932785,1933254-1933333,
1933394-1933916
Length = 275
Score = 27.5 bits (58), Expect = 6.9
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = +3
Query: 126 QKLE*PQNKTFVYYYPLRLLIPALIISSTRRRLLAITEQEFNICFFTI*LSKIPKSVGLN 305
QKL P + Y+Y +LL L I+STRRRL+ +F FF I +S+
Sbjct: 85 QKLR-PGGVSPSYFYREKLLYTCLPINSTRRRLI----PQFPHLFFA--TGNIHRSISTP 137
Query: 306 ASPVLKSKPIGSGLRRD 356
S S LR D
Sbjct: 138 TQIASTSSRESSALRMD 154
>05_03_0573 - 15635338-15635502,15637573-15637632,15637776-15638033
Length = 160
Score = 27.5 bits (58), Expect = 6.9
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = -2
Query: 475 KGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFK- 299
+G RLG+ A A + P A GY + I+ + E + I E +
Sbjct: 31 RGSRRLGVVRAASAEVAAPDAAAAAPGYTSDSLILYFKAEGTMEERAIPKITQALEGVEG 90
Query: 298 PTDLGIL-----DNYIVKKQILNSCSVIASNLLLVDEIMRAG 188
+DL +L + ++ K+ + +ASN LV+ I AG
Sbjct: 91 VSDLEVLIEEGIGSVVLTKETTVQATGVASN--LVEAIQGAG 130
>06_03_0793 + 24662506-24663512,24664470-24664787,24664996-24665323,
24665465-24665887,24665960-24666252,24666332-24666605,
24666856-24667358,24667464-24667785,24667875-24668220,
24668339-24668997,24669524-24669625,24669656-24670052,
24670155-24670270,24670360-24670386
Length = 1704
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/81 (23%), Positives = 32/81 (39%)
Frame = -2
Query: 469 KARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFKPTD 290
K+ G+ + L P +A G T+ K S + PE I +S
Sbjct: 938 KSSSGLSSKRTNALQNPAVMAAVRGGSYDSTVAKTSASSLVTPEQISNFISNLNLLDQIG 997
Query: 289 LGILDNYIVKKQILNSCSVIA 227
+ L++ Q LNS +++A
Sbjct: 998 IVELNHIFTHSQRLNSDAIVA 1018
>04_04_1341 -
32768785-32768847,32770469-32770582,32770809-32770858,
32770940-32771033,32771144-32771221,32771397-32771472,
32771557-32771651,32771748-32771927,32772491-32772802,
32773122-32773670
Length = 536
Score = 27.1 bits (57), Expect = 9.1
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Frame = -2
Query: 487 KDTVKGKARLGIQAYAEALLVI----------PKTLAVNSGYDAQDTIVKLQEESRLNPE 338
K T +R G+ AYA +L V+ L+V +G+D D+ + S E
Sbjct: 236 KPTYGRVSRFGLMAYASSLDVVGCFGSSVVDTATILSVIAGHDKMDSTSSSHDVSDYKSE 295
Query: 337 PIGLDLSTGEAFKPTDLGILDNYI---VKKQILNSCSVIASNL 218
+ LDL + +GI+ + V+ +++S AS+L
Sbjct: 296 LVPLDLLESKPLNGMRIGIIQETLGEGVETGVISSIKDAASHL 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,332,372
Number of Sequences: 37544
Number of extensions: 199894
Number of successful extensions: 461
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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