Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334F04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 125 2e-29
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 64 6e-11
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 64 6e-11
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 64 6e-11
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 52 2e-07
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 50 1e-06
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 49 2e-06
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 42 3e-04
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 41 5e-04
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 36 0.013
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 4.7
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 125 bits (302), Expect = 2e-29
Identities = 67/118 (56%), Positives = 89/118 (75%), Gaps = 2/118 (1%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKL-QEESRLN 344
EI A L K + +KG+A+LG +A+A+ALLVIPKTLAVN GYDAQ+T+VKL +E++
Sbjct: 419 EIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETLVKLIEEKTAAG 478
Query: 343 PE-PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 173
P+ +GLDL TG A +P GI DN VKK ++S +V+A NLLLVDE+MRAGM++LK
Sbjct: 479 PDIAVGLDLETGGAVEPQ--GIWDNVTVKKNSISSATVLACNLLLVDEVMRAGMTNLK 534
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/110 (28%), Positives = 60/110 (54%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI ++ + V GK L ++A+ AL +P + N+G D+ + + +L+ E
Sbjct: 408 EILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGR 467
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 191
+G+D+ GE T LG++++Y VK +++S + +L VD+I++A
Sbjct: 468 HNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/110 (28%), Positives = 60/110 (54%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI ++ + V GK L ++A+ AL +P + N+G D+ + + +L+ E
Sbjct: 408 EILMSSAIAVEAQKVAGKESLAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGR 467
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 191
+G+D+ GE T LG++++Y VK +++S + +L VD+I++A
Sbjct: 468 HNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/110 (28%), Positives = 60/110 (54%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI ++ + V GK L ++A+ AL +P + N+G D+ + + +L+ E
Sbjct: 408 EILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGR 467
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 191
+G+D+ GE T LG++++Y VK +++S + +L VD+I++A
Sbjct: 468 HNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Frame = -2
Query: 490 YKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ---EESRLNPEP----- 335
Y T+ + +L + +A ALL+IPK LA N+ D+ D + KL+ +++L P+
Sbjct: 429 YAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKW 488
Query: 334 IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 194
GLDL G + GIL+ + K + L + A +L +D++++
Sbjct: 489 AGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/108 (27%), Positives = 50/108 (46%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
EI+ E+ + G + I+ +A AL +PK +A N+G +T+ KL E
Sbjct: 449 EIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVAGK 508
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 197
+ G+D+ E I D Y K+ + + AS +L VD+I+
Sbjct: 509 KNAGIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQII 556
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Frame = -2
Query: 490 YKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ---EESRLNPEP----- 335
Y T+ + +L + +A ALL+IPK LA N+ D+ D + L+ +++L P+
Sbjct: 429 YAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTFLRAYHSKAQLIPQLQHLKW 488
Query: 334 IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 194
GLDL G + GIL+ + K + L + A +L +D++++
Sbjct: 489 AGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/109 (22%), Positives = 53/109 (48%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
E++ + + ++ ++GK + AY +A +IP+ L N+G DA D + KL+
Sbjct: 411 EMELSRLIREHSKGIEGKDQAFWMAYGQAFEIIPRQLCQNAGLDALDVLNKLRHRHAQGE 470
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 194
+ G+D+ + + IVK+ + + + A +L +D+ ++
Sbjct: 471 KWAGIDIHREAVGDNLVACVWEPSIVKRNAITAATEAACLVLSIDQTVK 519
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/110 (22%), Positives = 50/110 (45%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
E++ +L T G + +A+A+AL +IP TLA N+G T+ +L+
Sbjct: 429 EMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGN 488
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 191
G+++ G + ++ +V + S ++L +D+I+ A
Sbjct: 489 SSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMA 538
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/110 (22%), Positives = 50/110 (45%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
E++ +L T G + +A+A+AL +IP TLA N+G T+ +L+
Sbjct: 429 EMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGN 488
Query: 340 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 191
G+++ G + ++ +V + S ++L +D+I+ A
Sbjct: 489 SSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMA 538
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 36.3 bits (80), Expect = 0.013
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = -2
Query: 520 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 341
E+ + E+ + + G + +A AL VIP+TL N G + +L+ N
Sbjct: 417 EMALSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTLIQNCGGSTIRKMTELRAIHAQNA 476
Query: 340 E--PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLKG 170
E G+D ++G+ L I D V+ Q+L + + LL +D+I+ ++ G
Sbjct: 477 ENWTFGVDGTSGDLVDMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVSGTKKAVGG 535
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 165 YYPLRLLIPALIISSTRRRLLAITEQEFNICFFTI*LSKIPKSVGLNASPVLKSKPIGSG 344
Y+ L +L P + ++ LL + +ICFFTI L+ I +S S +L P GSG
Sbjct: 259 YFSLSILFP--MAGTSLILLLCFWIETHSICFFTIMLNIILQS--YYGSSLLAKMPPGSG 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,247,597
Number of Sequences: 27780
Number of extensions: 191795
Number of successful extensions: 506
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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