BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334F03f
(394 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 23 3.0
AY745225-1|AAU93492.1| 156|Anopheles gambiae cytochrome P450 pr... 23 4.0
AJ821850-1|CAH25390.1| 426|Anopheles gambiae alpha-2,6-sialyltr... 23 5.3
AY324308-1|AAQ89693.1| 134|Anopheles gambiae insulin-like pepti... 22 7.0
AY045760-3|AAK84944.1| 168|Anopheles gambiae D7-related 2 prote... 22 7.0
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 22 7.0
AJ133853-1|CAB39728.1| 168|Anopheles gambiae D7-related 2 prote... 22 7.0
AJ000036-1|CAA03872.1| 150|Anopheles gambiae D7r2 protein protein. 22 7.0
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 22 9.2
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 22 9.2
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 23.4 bits (48), Expect = 3.0
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 15 LKHSSCIIPVYAAHILFTNICSSTSLQI 98
L +S ++P+ A ++LFT I ++ S+ +
Sbjct: 285 LPPTSLVLPLIAKYLLFTFIMNTVSILV 312
>AY745225-1|AAU93492.1| 156|Anopheles gambiae cytochrome P450
protein.
Length = 156
Score = 23.0 bits (47), Expect = 4.0
Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = +3
Query: 6 KITLKH-SSCIIPVYAAH 56
+ITL+ +S IIPVYA H
Sbjct: 100 RITLRRGTSVIIPVYAIH 117
>AJ821850-1|CAH25390.1| 426|Anopheles gambiae
alpha-2,6-sialyltransferase protein.
Length = 426
Score = 22.6 bits (46), Expect = 5.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 253 SPSCCIHVPANKRVLSWWETDWLLSQCG 170
SP C + + AN RVLSW E + ++ G
Sbjct: 160 SPVCRM-MRANVRVLSWKEPPFTWNEIG 186
>AY324308-1|AAQ89693.1| 134|Anopheles gambiae insulin-like peptide
2 precursor protein.
Length = 134
Score = 22.2 bits (45), Expect = 7.0
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 113 MVTEVKVNGSEMEANTEVPPALAEKPVGLPPGKYSLIGWDMDTTGRR----LIDEICQ 274
M+T + + +AN V +A P LPPG + G + RR + DE C+
Sbjct: 65 MLTHYRTDYVHDQANQRVKVEVATLPDTLPPG-FPYPGAGVHRRSRRSSGGIYDECCK 121
>AY045760-3|AAK84944.1| 168|Anopheles gambiae D7-related 2 protein
protein.
Length = 168
Score = 22.2 bits (45), Expect = 7.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 80 INEFAN*ALMAMVTEVKVNGSEMEANT 160
+N AN + VTE +GS+ +ANT
Sbjct: 92 VNHAAN--MKKCVTEASTSGSDKKANT 116
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 22.2 bits (45), Expect = 7.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 41 GLRGSYFVYQHLFINEFAN 97
G+R + Y+ FIN+F N
Sbjct: 25 GIRAKFANYETKFINDFIN 43
>AJ133853-1|CAB39728.1| 168|Anopheles gambiae D7-related 2 protein
protein.
Length = 168
Score = 22.2 bits (45), Expect = 7.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 80 INEFAN*ALMAMVTEVKVNGSEMEANT 160
+N AN + VTE +GS+ +ANT
Sbjct: 92 VNHAAN--MKKCVTEASTSGSDKKANT 116
>AJ000036-1|CAA03872.1| 150|Anopheles gambiae D7r2 protein protein.
Length = 150
Score = 22.2 bits (45), Expect = 7.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 80 INEFAN*ALMAMVTEVKVNGSEMEANT 160
+N AN + VTE +GS+ +ANT
Sbjct: 92 VNHAAN--MKKCVTEASTSGSDKKANT 116
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 21.8 bits (44), Expect = 9.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 179 PVREALQYSLPFRFHSLSL 123
P +E + ++LP H+L+L
Sbjct: 333 PAKETIHFALPELLHNLNL 351
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 21.8 bits (44), Expect = 9.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 179 AEKPVGLPPGKYSLI 223
A+KPVG+ GK+ +
Sbjct: 354 AQKPVGISAGKFCFV 368
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,810
Number of Sequences: 2352
Number of extensions: 8427
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -