Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334F02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2XZY8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_UPI0000586588 Cluster: PREDICTED: similar to spEchinoid...    32   6.9  

>UniRef50_A2XZY8 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 751

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = -2

Query: 361 DASPPPDEWGPSSNFCMRCCTSISPGCSCVVGVTRCEARPACAVGVGTPALTG 203
           D SPPP    P +    R CT++S   S         A PA AVG G P+  G
Sbjct: 330 DTSPPPPPPSPPT----RRCTTLSSPTSPATTTAAAAAAPAAAVGSGAPSPYG 378


>UniRef50_UPI0000586588 Cluster: PREDICTED: similar to spEchinoidin;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to spEchinoidin - Strongylocentrotus purpuratus
          Length = 190

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 176 WLGTTIQCSSSKSWCPDTNST-SGSRLTPCYSHYT*TSRRYRCATTHAKIRTGTPFIW 346
           WLG  + CS     C D +ST S   LT  +S    T       +  +K+ T T ++W
Sbjct: 53  WLGAEMHCSGFSVPCSDVDSTISLGHLTSIHSKEEMTFLSVLYESIRSKVVTSTTYVW 110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,594,179
Number of Sequences: 1657284
Number of extensions: 7466315
Number of successful extensions: 19645
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19629
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)