Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS334E12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    29   1.5  
Z81088-1|CAB03124.1|  364|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
            protein Y45F10B.10 protein.
          Length = 1592

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 97   NGESFDSATVGSYLVALEQPTGTYKFLSAYIDMLCTFHEAS 219
            +G   D   + +Y +A EQ  GT+K  +A +  LC+ +++S
Sbjct: 884  SGNQSDPGVIYAYHIASEQLIGTFKGHTAAVTCLCSSNDSS 924


>Z81088-1|CAB03124.1|  364|Caenorhabditis elegans Hypothetical
           protein F53F1.1 protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 79  THIEYANGESFDSATVGSYLVALEQPTGTYKFLS 180
           + +  AN  S D  +  SY V L  PT TY+ LS
Sbjct: 156 SQVTVANNISVDEISTISYNVNLTMPTCTYQILS 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,108,825
Number of Sequences: 27780
Number of extensions: 249250
Number of successful extensions: 702
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)