Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS334E11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 63 2e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 57 1e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 56 4e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 56 4e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 52 6e-07
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 52 6e-07
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 51 8e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 50 3e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 47 2e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 47 2e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 47 2e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 47 2e-05
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 47 2e-05
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 46 3e-05
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 45 5e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 45 5e-05
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 39 0.005
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 38 0.008
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 38 0.008
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 38 0.008
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 38 0.008
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 38 0.008
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.008
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 38 0.011
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 38 0.011
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 34 0.10
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +3
Query: 12 TLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDA 191
T++ GVPQGS+LGP L+LIY D+P+ SR V FADDT++L + + +Q ++
Sbjct: 633 TIEAGVPQGSVLGPTLYLIYTADIPT--NSRLTVSTFADDTAILSRSRSPIQATAQLALY 690
Query: 192 ISCVVHWFRINNLLLNSKKTKCIKFTL 272
+ + W + +N +K K + FTL
Sbjct: 691 LIDIKKWLSDWRIKVNEQKCKHVTFTL 717
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLPS---FIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAI 194
GVPQGS+LGP L+ +Y +D+P + + + FADD + ++ + + D + D
Sbjct: 639 GVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFA 698
Query: 195 SCVVHWFRINNLLLNSKKTKCIKFTLK 275
W R N+ +NS K+ + FTLK
Sbjct: 699 YRFSEWARRWNIGINSSKSNNVCFTLK 725
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/86 (33%), Positives = 48/86 (55%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAI 194
++ GVPQGS+LGP L+ +Y D P I+ FADDT++L + K ++ ++ +
Sbjct: 632 IEAGVPQGSVLGPILYTLYTADFP--IDYNLTTSTFADDTAILSRSKCPIKATALLSRHL 689
Query: 195 SCVVHWFRINNLLLNSKKTKCIKFTL 272
+ V W + +N +K K + FTL
Sbjct: 690 TSVERWLADWRISINVQKCKQVTFTL 715
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/86 (33%), Positives = 48/86 (55%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAI 194
++ GVPQGS+LGP L+ +Y D P I+ FADDT++L + K ++ ++ +
Sbjct: 632 IEAGVPQGSVLGPILYTLYTADFP--IDYNLTTSTFADDTAILSRSKCPIKATALLSRHL 689
Query: 195 SCVVHWFRINNLLLNSKKTKCIKFTL 272
+ V W + +N +K K + FTL
Sbjct: 690 TSVERWLADWRISINVQKCKQVTFTL 715
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 51.6 bits (118), Expect = 6e-07
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K L +
Sbjct: 641 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 700
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKF---TLKCIKSSLNVRQV 308
+ + W N+ +N++K + F T C SLN R +
Sbjct: 701 EYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRLI 744
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 51.6 bits (118), Expect = 6e-07
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K L +
Sbjct: 443 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 502
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKF---TLKCIKSSLNVRQV 308
+ + W N+ +N++K + F T C SLN R +
Sbjct: 503 EYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRLI 546
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 GVPQGSILGPFLF-LIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAISC 200
GVPQGS+LGP L+ +Y L + R E+V FADD +LL K + + N I
Sbjct: 50 GVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRA 109
Query: 201 VVHWFRINNLLLNSKKTKCI 260
+ HW L L +KTK +
Sbjct: 110 IEHWLSSMGLELAPEKTKAV 129
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLP-----SFIESRHEVV-LFADDTSLLFKMKRQLQVYD 176
++ GVPQGS+LGP L+ ++ DLP + R ++ +ADD +LL+ +
Sbjct: 637 MRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAAR 696
Query: 177 EVNDAISCVVHWFRINNLLLNSKKTKCIKFTLKCIKSSLNVRQVDXXXXXXXXXXXXXXX 356
+ + ++ + W + L +N +KT FTLK + V
Sbjct: 697 GLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLS------PVTAPIELEGVILDQPSQ 750
Query: 357 XXXXGITVDSKLQWGPHI 410
GIT+D +L +GPH+
Sbjct: 751 AKYLGITLDKRLTFGPHL 768
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKM 152
++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT +L +
Sbjct: 238 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRS 297
Query: 153 KRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 275
K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 298 KYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 338
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKM 152
++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT +L +
Sbjct: 685 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRS 744
Query: 153 KRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 275
K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 745 KYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKM 152
++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT +L +
Sbjct: 685 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRS 744
Query: 153 KRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 275
K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 745 KYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKM 152
++ GVPQGSILGP L+ IY +D+P SF + ++ +ADDT +L +
Sbjct: 685 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRS 744
Query: 153 KRQLQVYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 275
K + + ++ W + ++ +N+KKT I F+LK
Sbjct: 745 KYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLPSFIESRH-EVVLFADDTSLLFKMKRQLQVYDEVNDAISC 200
GVPQGS+LGP L+ I + + S + R E+ FADD ++ K ++ D N AI+
Sbjct: 612 GVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITA 671
Query: 201 VVHWFRINNLLLNSKKTKCI 260
+ W L + + KT+ +
Sbjct: 672 AIEWLEKVGLKIAAHKTEVV 691
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/51 (39%), Positives = 34/51 (66%)
Frame = +3
Query: 3 SGTTLKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMK 155
S T++ GVPQGS+LGP L+ +Y D+P+ + + FADDT+++ + +
Sbjct: 169 SDFTIEAGVPQGSVLGPILYTLYTADIPT--NYQLTIFTFADDTAIISRSR 217
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAI 194
L GVPQGS+LGP LF I+ +D+P + + LFADD ++ ++ + +
Sbjct: 662 LNAGVPQGSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAVYSAGFSYSEINQSMQSYL 719
Query: 195 SCVVHWFRINNLLLNSKKTKCIKFT 269
+ + +++ + +N KT I FT
Sbjct: 720 NELDIYYKKWKIKINPNKTNAIFFT 744
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAI 194
L GVPQGS+LGP LF I+ +D+P + + LFADD ++ ++ + +
Sbjct: 610 LNAGVPQGSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAVYSAGFSYSEINQSMQSYL 667
Query: 195 SCVVHWFRINNLLLNSKKTKCIKFT 269
+ + +++ + +N KT I FT
Sbjct: 668 NELDIYYKKWKIKINPNKTNAIFFT 692
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 38.7 bits (86), Expect = 0.005
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP-SFI-----ESRHEVVLFADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P +I R + +ADDT +L
Sbjct: 697 GVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNE 756
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK--CIKSSLNVRQVDXXXXXXXXXXXXXXXX 359
+ + W + +N+ KT + FTLK +S+NV+
Sbjct: 757 NYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVK-------IKGQTIKKESKQ 809
Query: 360 XXXGITVDSKLQWGPHI 410
G+T+DSKL H+
Sbjct: 810 SYLGVTLDSKLTLSSHV 826
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 569 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 628
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK-CIKSSLNVRQVDXXXXXXXXXXXXXXXXX 362
+ + W + +N+ KT + +TLK I ++L ++
Sbjct: 629 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKI------KGQAIKKESKQS 682
Query: 363 XXGITVDSKLQWGPHI 410
G+ +DSKL PH+
Sbjct: 683 YLGVILDSKLTLSPHV 698
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 685 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK-CIKSSLNVRQVDXXXXXXXXXXXXXXXXX 362
+ + W + +N+ KT + +TLK I ++L ++
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKI------KGQAIKKESKQS 798
Query: 363 XXGITVDSKLQWGPHI 410
G+ +DSKL PH+
Sbjct: 799 YLGVILDSKLTLSPHV 814
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 685 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK-CIKSSLNVRQVDXXXXXXXXXXXXXXXXX 362
+ + W + +N+ KT + +TLK I ++L ++
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKI------KGQAIKKESKQS 798
Query: 363 XXGITVDSKLQWGPHI 410
G+ +DSKL PH+
Sbjct: 799 YLGVILDSKLTLSPHV 814
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 647 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 706
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK-CIKSSLNVRQVDXXXXXXXXXXXXXXXXX 362
+ + W + +N+ KT + +TLK I ++L ++
Sbjct: 707 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKI------KGQAIKKESKQS 760
Query: 363 XXGITVDSKLQWGPHI 410
G+ +DSKL PH+
Sbjct: 761 YLGVILDSKLTLSPHV 776
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.9 bits (84), Expect = 0.008
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 685 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK-CIKSSLNVRQVDXXXXXXXXXXXXXXXXX 362
+ + W + +N+ KT + +TLK I ++L ++
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKI------KGQAIKKESKQS 798
Query: 363 XXGITVDSKLQWGPHI 410
G+ +DSKL PH+
Sbjct: 799 YLGVILDSKLTLSPHV 814
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +3
Query: 15 LKMGVPQGSILGPFLFLIYINDLPSFIESRHE---VVLFADDTSLLFKMKRQLQVYDEVN 185
L G+PQGS L LF+I I D+ + +RH+ + L+ADD + K+K V ++
Sbjct: 637 LHNGIPQGSPLSVVLFMIAIEDINDIV-TRHKDIYISLYADDAIIFTKIKNINTVREKFL 695
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLKCIKSSLNVRQV 308
+ + + W + L +K + + C K N+ +
Sbjct: 696 EILQEINSWGATSGASLAIEKCQTLHI---CRKQRCNLSDI 733
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.5 bits (83), Expect = 0.011
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKMKRQLQVYDEVN 185
GVPQGS LGP L+ I+ +D+P + S E ++ +ADDT +L
Sbjct: 685 GVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNE 744
Query: 186 DAISCVVHWFRINNLLLNSKKTKCIKFTLK 275
+ + W + +N+ KT + FTLK
Sbjct: 745 NYLKSFSDWADKWGISVNAAKTGHVIFTLK 774
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 2/132 (1%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLPSFIESRHEVVL--FADDTSLLFKMKRQLQVYDEVNDAIS 197
G+PQGS + LFLI N L + I E+ +ADD L+ + +++
Sbjct: 632 GIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFD 691
Query: 198 CVVHWFRINNLLLNSKKTKCIKFTLKCIKSSLNVRQVDXXXXXXXXXXXXXXXXXXXGIT 377
+ +W + L+ K + + K R GIT
Sbjct: 692 DIENWCSYSGASLSLSKCQHLHICRK--------RHCTCKISCNNFQIPSVTSLKILGIT 743
Query: 378 VDSKLQWGPHIH 413
+++K +W HI+
Sbjct: 744 LNNKYKWNTHIN 755
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 24 GVPQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKMKRQLQVYDEVNDAISCV 203
G PQGSI GPF++ I ++ L ++ ++ +ADD LL + + + ++ +S V
Sbjct: 631 GCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIV 690
Query: 204 VHW-FRINNLLLNSK 245
W + + L SK
Sbjct: 691 ETWGAEVGDCLSTSK 705
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,818,835
Number of Sequences: 53049
Number of extensions: 334330
Number of successful extensions: 827
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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